Cololabis saira (Pacific saury): 133420606
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Entry
133420606 CDS
T09849
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 1 isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133420606
Membrane trafficking [BR:
csai04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
133420606
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_2
TPR_1
SH3_1
SH3_9
SH3_2
DUF6437
Motif
Other DBs
NCBI-GeneID:
133420606
NCBI-ProteinID:
XP_061566323
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All DBs
Position
20:complement(23060199..23097664)
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AA seq
1292 aa
AA seq
DB search
MSGGSDHRYRREEGPPGAPGAQPNRHRQGSAGLPLVLELVRGPGGLPADEQSQEKLKEKL
HLLQAESSDVDDVLTELSTHIVSISSREKTIFVTFKSFQEIWKFTTYYTTGFLAHCLENL
LLDQRVWLTSLEEDISIRVRIHEETLNLVYRSLLMQEGSLFASCSSSQMFDGSTSAGDLY
LEQGDVAQFEPPYLGSGWTVLSLADGARGTAPRPALEPVVPFHQWFLKSCSESILVGDGK
PACDFPLHFAAGVCVATVEYDAEGPDELSVAPGDRIVVVGLLVPCFDWFTGRKEATGGVG
LVKTSSVEPSREMFDATDIFLEGEEWMFSSQQEDKVIEEAIDKLKQQSQNDSGHNYKLDI
ATDQNSENETSTSSTRAEPHQTELMENVQEILAQVKPSSSYSAVSRNGTPGGSEDVSLPC
FTVHPVVEGTTDAESFVPLFGFLDGGRYKVEFGLLYALGSEGLASSVFAGHADEDELIAF
LGVARETARKRRLLWLQTRLCFLLGRLCAGKSKFSQARVYFEESLSVPREGFADLRLLAS
IYSNLSTIYLLQKNKEGFFGVAERLGALLLGIPDTMKSLEDDSVLRYILKKAILSHNPRA
EARACYLLAKHHWSRSEDRLVVPYLERLLVVWDEAQGLWSISPSHGYLTLGELYRKLQLP
QLSVSSAKRASLQPSATLTDSLRSMMLVLSDATRPDGIAGQEPPILAQVAPYLYRAKRQA
FSEVQEGGGALYHALSHHLTLCLCQLFYKHRMVRQAIRHMHALIDSTPPPEQPSTSVLER
NSAIIWLAWLHIDNNEPRVAVELLDSVLAPADGTSTQEGVVLNMRGVALRCVGDHRGAAK
SYQAAAHICQECEDMPNWAVAQANLGLLCLKAGAKTLAQRYLTEAVQLFSKLGEESHGEN
FITVLLELGQLYMRQQQLDYGKGCLEWALLLAIRAKLPDRQLGAIGHLCHLYERESPDQA
QCIVYRRHQIQLLRCAGRRGQEGSALEAISQLYLSLCTERAYRAALDYTKTSLAIFIDLG
CREKEAYGWLTAGKIYQLLGQTELVDIYLQAAQDVALSTGDTSFILKLLEAAGDIFLNSL
EDQDKAITFYRDRALPIATKSGGARTRLRLCNKLSEVMLRLRMYAEAVEFAQIAVDISVS
LGERLNERVACHRLAALFVHLHQHELAEHYYLKTLSLCPSPLEFDEETLYYVRVYQTLGD
ILFHDLKDPFDAAGYYHLALAAAMDLGNKRSQLHLCTRLATIYHNFLRDRERSLFFYQKA
RAFAAELNIKRINISPDQQLVGSQPHPERSGQ
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcggctccgatcacaggtaccggagggaagaggggccccccggggcccccggg
gcccagccgaaccggcaccggcagggcagcgcaggtctgccgctggttctggagctggtc
agaggtccaggtggacttcctgcagacgagcagtcgcaggagaagctgaaggagaaactg
cacctcctgcaggctgaaagcagcgacgtcgacgacgttctcacggaactgtcaactcat
atagtctccatcagcagtagagaaaaaaccatctttgtgactttcaaaagtttccaggaa
atatggaaattcaccacgtattacacgacagggtttttggctcattgtttggagaacctg
ttgctggaccagagagtttggctcacgtctctggaggaggacatctccattcgagttcgg
attcacgaggaaactctgaacctggtctacagaagcctcctcatgcaggaaggctcattg
tttgcaagttgcagctccagccagatgttcgacggctccacatctgcaggagacctgtac
ctggagcagggggatgtggcccagttcgagccgccctacctgggctcaggctggacggtc
ctgtccctggctgatggggcccggggaacggcacccaggcctgctctggaaccagtggtc
cccttccatcagtggtttctgaagtcctgctcggagagcattttagtgggggatggaaaa
cccgcctgtgacttccctctgcatttcgccgcaggagtgtgtgtggccacagtggagtac
gatgctgaaggtccagatgagctgagtgtggcacctggtgatcgcatcgtcgtggtggga
cttctggttccttgttttgattggttcactgggaggaaggaagcgacgggaggagtcggt
cttgtaaagaccagctcagtagaaccatccagagaaatgtttgacgccacagatattttt
ttggaaggagaggaatggatgttctccagtcagcaggaggacaaagtcatagaagaagca
atagataaattgaagcaacaatcacaaaatgacagcggtcataactacaaactggacatc
gccacagaccaaaactctgaaaatgaaacttccacttcttctaccagagccgaacctcac
cagactgaactgatggaaaatgtccaggagattcttgctcaagtaaaaccttcctcatcg
tacagcgctgtgagcaggaatgggactccagggggatcagaagacgtaagcctcccctgt
ttcaccgttcaccccgttgtggagggaaccaccgacgccgagagcttcgtccctctcttc
ggtttcttggatggaggccggtacaaggtggagttcgggcttctctacgcgctgggctct
gaagggctcgcctcctccgtgttcgcaggccacgctgacgaggacgagctgattgctttt
cttggtgttgccagggaaacggccaggaagagacgcttgctttggctgcagactcgtttg
tgcttcctgctgggcaggctctgcgccgggaagtccaagttcagccaggcccgggtctac
tttgaggagtccctcagtgttccccgggaaggcttcgccgacctcagactgttggccagc
atctactccaacctgtccaccatctatcttttgcagaagaacaaagaaggtttctttgga
gtggcagagcgacttggggccttgctgcttggaatccctgacaccatgaaaagcttagag
gatgactctgttctcagatacatcctcaagaaagccattttatctcacaacccaagggcg
gaggccagggcttgctatctgctggcaaagcaccactggagccgctctgaggaccgcctg
gtcgtcccttatctggaaaggctccttgttgtttgggacgaggctcagggactgtggagc
atctctcccagccacggatacctgaccctgggagagctgtacaggaaactccagcttcct
cagctcagtgtcagttcggccaagagagcgtctctgcagccgtccgccactctgacggac
agcctgcgcagtatgatgctcgttttgagcgatgccacgagacctgatggcatcgcagga
caggagccccccattcttgctcaggtggctccgtatttgtaccgagctaaaagacaggcg
tttagcgaggtgcaggaagggggaggcgccctttaccacgctctgagccatcatctcacc
ctgtgtctctgtcagctcttctacaagcacaggatggttagacaggccatccgccacatg
cacgctctcatcgacagcactccacctccagagcagccgtccacctcggttctggagaga
aacagcgcaatcatctggctggcgtggctccacattgacaacaacgagccccgtgttgct
gtggagcttctggactcggtcctggcgcctgcagacggcacctctactcaggagggggtg
gtgctcaacatgcgtggcgtggcgctgcggtgcgtgggcgaccaccggggggcagccaag
agctaccaggctgctgctcacatctgccaggagtgcgaggacatgccaaactgggccgtg
gctcaggcaaaccttggcttgctgtgtctgaaggcgggagccaagacgttagcgcagagg
tacctaacggaggccgtgcagctcttctctaaactcggggaagaaagccacggggaaaac
ttcatcacagtgctgctggagctgggacagctctacatgaggcagcagcagctggactac
gggaaaggatgcttggagtgggctctgctgctggctatccgagccaagctgccggaccgc
cagctcggcgccatcgggcacctgtgccatctgtacgagcgtgagagtccagaccaggcc
cagtgcatcgtctaccggcggcaccagatccagctgttgaggtgtgcaggacgccgagga
caagaggggtctgccctggaggccatcagtcaactctacctcagtctgtgcacggagagg
gcgtaccgggcggctctggactacaccaagaccagtctggccatcttcatcgacctgggc
tgcagggagaaagaggcgtacggctggctgacggccgggaagatctaccagctgctgggc
caaaccgagctggtggacatctacctccaggcggctcaggacgtggctctcagcactgga
gacaccagcttcattctgaagcttctggaagctgccggagatattttcttgaacagtttg
gaggaccaagacaaggccatcaccttctacagggaccgagcgctgcccatcgccacgaag
agcggcggcgctcgcaccaggctgaggttgtgcaacaagctgagcgaagtcatgctgcgt
ctcaggatgtacgctgaagcggtggagtttgctcagatcgccgtggacatcagtgtcagt
ctgggtgagcgtctgaacgagcgcgtggcctgccaccgcctggctgctctgttcgtccac
ctccaccagcacgagctggctgagcactactacctgaagacgctgagcctctgtcccagc
cctctggagttcgacgaggagacactgtactacgtccgagtttaccagacgctgggggac
atcttgttccacgacctgaaggacccgttcgatgcagccggctactaccacctggctctg
gcggcagccatggacctgggcaacaaacgatcccagctgcacctgtgcacccgcctcgcc
accatctaccacaacttcctcagggaccgtgagcgctccctgttcttctaccagaaggcc
cgggcgttcgccgcagagctcaacatcaaaaggatcaatatctcgcccgatcagcagcta
gtcggcagccagccacatccggagaggagtggacagtag
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