Cololabis saira (Pacific saury): 133444869
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Entry
133444869 CDS
T09849
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-3-like
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
133444869
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csai04040
]
133444869
Ion channels [BR:
csai04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
133444869
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
133444869
NCBI-ProteinID:
XP_061578751
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All DBs
Position
5:23820167..23845430
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AA seq
1333 aa
AA seq
DB search
MLKNGSHKNPEESSEDGQAQPGVIGWLSNGFVSALPQPPGSPRLSRANSDARPPEEDGER
SGVIGWVAQGLTKVLPQPEGKYKEVIEIQNAANAAAAPKEEHTEVYEVATMPDFDPLPHI
PVVEMVSEVEASEVESLNSQFPPNVVDWIKHMIPQPVPPGGSTEHPPKTSRSLDKILSPP
PESLSGISLDTDSKSSGVVDWFVSGLGLKMPQLVIAPKDEVEGPTEVLQKASSKLQLDMV
LEDVESDNEVQQKCEARTKTAALTKSKSPSKVTAKQQQQQQQQEKQPAQPSPPQPQKCNE
ATLEVPPESEMKLPQEDAETQTGRWTPFIESIKREAEDVALATMEERLIQERIEMTRLAE
EVARQTAEMAVRQMASEGTSIKLSLGSQELLDEPEGELPVPEEDEEEENCNVEPNDDTEN
EESLPQDEQKVETEEPTDKEPEPTEDAEPKESSSFPPTEPAEEPAPKEISPSPPTEPAEE
PAPKEISPSPSAESAEEPEPKEITSSSAASSQQEKTSEPESASEEEPETKTQEDGSDPQP
VTQQPQKAENNQVAHTEKEAEATGEGCGAGDGDGGEENSEIPSTQDPKVTTLTVPVTPSG
GRQSKGDKDSGRNHRTIWTKTKLVQSQSEDDDDEVSIPARAWPSQSSLHSGDDALKERPS
SSASQTSAMVNERLQELVRMFKQRTEKAKEKLVDLDSSDEDSVITSPTQPAPGSLPRDGE
PADKQPGPSGVETVSEEAVSDRCCKVKTPRWIRACAHFRFPASIDPFTNLMYVLWMFWVS
LAWNWNVWLIPVRWAFPYQTPGNIHYWLLVDYVCDLIYILDISVFQPRLQFVREGDIVCD
KTEMRKNYMKTVRFKFDVISLVPLELFYFKVGINPLLRLPRLLKINSFFEFNDRLEAILT
KAFIYRVIRTTTYLLYCLHCNACLYHWTSAYIGIGSTQWVYNGIGNGYIRCYYFAVKTLI
TIGGLPDPTSLSETVFQLINYFVGVFAFSIMIGQMRDVVGAATAGQTYYRTCMDHTIKYM
ASYRIPKDVQNRVKTWYNYTWQSQGMLDEQELLTQLPDKMRLDIAVDVNYSIVSKVPLFQ
GCDRQMIFDMLKSLRSVVYLPGDYVCKKGEVGREMYIIKAGEVQVVGGPDGRTVFATLRA
GSVFGEISLLAVGGVNRRTANVIAHGFANLFILDKKDLNEILIHYPESKKLLRKKARKML
NKGKKPEPKEEVKEQPPVPAASHRSETPKLLRAALEMTERCSGLKGAMGKVKEKTNKSSI
SLQPTISSSLPPPSPTASVGLDRDRDRDSPSSTSASSTALRSASRCRNTVVPPSAIQLHC
DTTEKDDASEDDE
NT seq
4002 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagaatggttctcataaaaatccagaagagtcttcagaggacggccaggcccag
cctggagtgataggctggctgtccaacgggtttgtcagcgcgctgccgcagcctcctggc
tcccctcgactcagcagggccaactctgacgccaggccgccagaagaggatggagaaagg
tctggcgtgatcggttgggtcgctcagggtctgaccaaagtgctgcctcagcctgaaggc
aaatacaaagaggttatcgagatccaaaacgccgccaatgccgccgccgcccccaaagag
gaacatacagaggtgtatgaagtggcaacaatgccagatttcgatcctctcccacacatc
ccggtggtggagatggtgtcagaggtcgaagcatcggaagtagagagcttgaactctcag
tttcctcccaatgtggtcgactggataaagcatatgatccctcaacctgtgccccccggt
ggatccaccgagcacccacccaaaacttcccgctctctcgacaaaattctgtctcctcca
cccgaatctctcagtggaatctcactggacactgacagcaagagttctggtgtggttgac
tggtttgtgtcgggactgggtttgaagatgccacagcttgttattgcaccgaaggatgaa
gtggagggtccaactgaagtcctacaaaaagcttcatccaaactgcaactggacatggtg
ctggaggatgtggagtcagacaacgaggtccaacagaaatgtgaagctcgcaccaaaact
gcagcgctgaccaaatccaaaagtccttcgaaagtcacagcaaagcagcagcagcagcag
cagcagcaagaaaaacagccggcacagcccagtccaccgcagcctcagaagtgtaatgag
gccaccctcgaagtaccacccgagagtgaaatgaaactacctcaggaagatgctgagacg
cagacgggccgctggacaccgtttattgaaagcatcaagagggaggctgaggatgtggcc
ttggctaccatggaggagcgtctgattcaggagcgtatagagatgacccgcctggcagaa
gaggtggccagacagacagctgagatggctgtgaggcagatggccagtgagggaacatcc
atcaagctttcactgggaagtcaggagctgctggacgaacccgagggagaattgccagtg
ccagaagaagatgaagaagaggaaaactgcaatgtggagccaaacgatgacacagaaaac
gaagagagtcttcctcaggacgagcaaaaagtggagactgaggaacctaccgacaaggaa
ccagagccaacggaggacgcagaaccaaaggagagctcatcctttccaccaacagaacca
gcagaggaaccagcaccaaaagagatctcaccgtctccaccaacagaaccagcagaggaa
ccagcaccaaaagagatctcaccgtctccatctgcagaatcggcagaggaaccagagcca
aaggagatcacatcgtcttcagctgcgagttctcaacaagaaaagacctctgagccagaa
tctgcatcagaagaagaaccagagaccaagacccaggaagatggttcagatcctcagcct
gtaacccagcagccccagaaagcagaaaacaatcaagttgcccatactgagaaggaggcg
gaagctactggtgaaggctgcggtgcaggcgatggggatggaggggaggaaaacagtgaa
attccttccacccaggaccccaaagtaacaaccctcactgtccctgtgactccatcagga
ggtcgtcagagtaaaggagacaaagatagtgggaggaatcacaggactatctggacaaag
accaagctggtacagtctcaaagtgaggatgacgatgatgaagtcagcatccccgccaga
gcctggcccagccagtccagcctgcacagtggagatgacgctctcaaagagcgtccgtcg
tcttcagccagtcagaccagcgcaatggtcaacgagcgacttcaagaactggtcaggatg
ttcaagcagagaacggagaaggccaaggagaaactggtggacctggacagctcagacgaa
gacagcgtcatcacctctccaactcagcctgctccgggatctctgccccgggacggggaa
ccggctgataagcagccaggcccttcaggagtggagaccgtttcagaggaggcggtgtcc
gaccgctgctgcaaggtgaaaactcctcgatggatacgagcctgtgcgcacttccgcttc
cctgccagcatcgaccctttcaccaacctgatgtatgtgctgtggatgttttgggtgtct
ctggcctggaactggaacgtgtggctcatccccgtgcgctgggcctttccttaccaaact
ccaggcaacattcactactggctgttggtcgactacgtgtgcgacctcatttacatcctt
gacatcagtgttttccagccgcgcctgcagtttgtgcgtgaaggggacatagtgtgtgac
aaaacagagatgagaaagaattatatgaaaacagtccgatttaagtttgatgtgatcagc
cttgttcctcttgagctcttttatttcaaagtcggcatcaacccgctgcttcgtttaccc
aggctgctgaagatcaactccttctttgaattcaacgaccgtctggaggccattttgacc
aaagccttcatttacagggtgattcgaaccaccacttatctcctctactgtctccactgc
aacgcctgcctctaccactggacctcggcctacatagggataggatcaacccagtgggtg
tacaacggcatcgggaacggttacatccgctgttactactttgcagtgaaaactctgatc
acgatcggaggcctgccagaccccacctccctgtccgagacagtctttcaactcatcaac
tattttgtgggagtctttgccttctctattatgattggacagatgcgtgatgtggttggt
gcagcaaccgcaggtcagacctactaccgcacctgcatggatcacaccattaaatatatg
gcgtcttatcgcatcccaaaggatgtccagaaccgcgtcaaaacctggtacaactacacc
tggcaatcacagggcatgctggatgagcaggagcttctcactcagctgccagataaaatg
cgtctggacatagctgtagatgtcaactactccatcgtgagcaaagtccctctttttcag
ggttgtgaccgacagatgatctttgacatgctaaagagtttacgttctgtcgtctacctg
ccaggggattatgtctgcaaaaagggtgaagtaggtcgggagatgtacatcatcaaagcg
ggggaggttcaggtggttggagggcctgatgggaggacggtgtttgccactcttagagca
ggttcggtgtttggagagataagtttacttgcagtcggtggggttaacaggcgcacagcc
aacgtgatcgctcatggtttcgctaatctgttcattctggacaaaaaagatctaaatgag
atcctgatccattatcctgagtccaagaagctgctgcgcaagaaagccaggaagatgctg
aacaagggaaagaaacctgaacccaaagaagaagtaaaggaacagcctccagtgccagca
gcatctcacaggtcagagactcccaaactgctcagagcagcactagagatgaccgagaga
tgctctggacttaaaggagctatgggtaaagtcaaagagaagaccaacaagtccagtatt
tcactgcagccaaccatctcttcctctctacctccaccatctcccacggccagtgttgga
cttgacagagacagagacagagattcgccgtcgtccacctctgccagttccacagcactt
cgctctgcatcccgttgcagaaacactgtagtgcctccgtctgcgatacagctccactgt
gacacgactgaaaaagatgatgccagtgaggatgatgaatga
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