Cololabis saira (Pacific saury): 133445855 Help Entry 133445855         CDS       T09849                                  Symbol col4a1 Name (RefSeq) collagen alpha-1(IV) chain   KO K06237   collagen type IV alpha Organism csai  Cololabis saira (Pacific saury) Pathway csai04382   Cornified envelope formation csai04510   Focal adhesion csai04512   ECM-receptor interaction csai04518   Integrin signaling csai04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:csai00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     133445855 (col4a1)    04518 Integrin signaling     133445855 (col4a1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     133445855 (col4a1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     133445855 (col4a1)  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     133445855 (col4a1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:csai04147]     133445855 (col4a1)    00536 Glycosaminoglycan binding proteins [BR:csai00536]     133445855 (col4a1) Exosome [BR:csai04147]  Exosomal proteins   Exosomal proteins of other cancer cells    133445855 (col4a1) Glycosaminoglycan binding proteins [BR:csai00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    133445855 (col4a1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  133445855 NCBI-ProteinID:  XP_061579336 LinkDB All DBs Position 6:14821256..14897510 Genome browser AA seq 1641 aa AA seqDB search MLLPPGALLLLLAALYSSVDLTGAEGGCGASCGKCDCSGVKGAKGERGFPGLQGNMGFPG MQGHEGPPGPMGPKGDLGESGAPGMKGVRGPPGLPGFPGNPGLPGINGNDGPPGPYGIPG CNGTKGDRGRDGVPGFLGPQGSPGIAGIPGMKGDPGGVMGIVPLKGERGFPGTPGLPGQS GLRGPTGPPGSRGYPGLKGDSGPPGPPGEKGDRLAFVSQKGDKGSQGARGPPGPPGHQEA TGETTVLVPGPPGIHGQKGDKGEHGFCLPHQHGIKGEPGQPGSEGKRGKDGEDGLKGEKG FPGTLPGYPGLPGEKGERGPPGYGSGEPGPPGTPGFPGLNGEKGFPGPQGEAGPPGAHIE GPRGERGQKGEVGEKGDTGVEGESLPGPPGQPGLRGPPGPPGQPIDPNACDVEKGNPGPA GPPGLQGEVGQKGDKGDTCLRCEVDGLPGLPGPQGNKGEQGPPGSGGSKGEKGGHGFPGQ SGRPGVPGTPGLMGSPGAVGEPGDISVAPGLKGDKGLPGLPGLEGRSGQDGLSGREGIPG LPGVKGEPAKEGIKGERGPDGEPGLVGPIGERGPPGVPGFGQTGERGEKGSQGRPGTSGV PGYPGPKGEPGKGVITPGPQGVPGPRGDNGRPGLQGEIGLPGDSGLPGFPGQKGETGPPG IGFPGPSGQKGISGIPGASGLPGEPGKPGRDGVTGNSGLPGQKGEPGRGLPGPKGSQGPP GVSGFPGEKGNIGFPGVPGREGTSGPPGPQGHKGEIGTPGLPGQIGREGPPGKGSPGAPG PEGPAGEPGPYGGIGSKGDKGFPGLPGLDMPGPQGEKGTPGFPGIPGFKGLPGPPGLSGR DGLIGNEGPKGEMGVMGTPGSPGYPGLPGNPGSPGERGDPGLTGPRGEIGGFGTKGERGS QGSPGPPGNMSETEMVNMRGEKGNPGDPGVRGDTGEKGHIGIAGDPGMPGKDGEPGLPGK PGEKGDLGYPGEPGSLGQPGTKGSVGEMGVPGPVGPKGTKGDSGTPGHPGFQGTGGDKGD QGTAGEPGIGVPGFPGEKGLSGQPGFPGTPGEKGEKGYGGMPGKPGHEGSKGDKGSIGFP GQAGRPGEKGGPGLPGSAGEAGHDGRPGEGGLQGPPGPRGEKGEAGVDGIPGSTGERGDP GLSGQGFTGPPGDLGVKGDKGSPGFPGTPGHPGVPGIKGDKGLPGQQGVQGETGEQGLQG VAMEGPKGERGDTGPPGQAGVRGEPGPGGLSGRDGLKGDKGDQGLPGFQGETGRKGDFGA PGMPGQSGLPGIDGQKGERGLQGVPGFPGPKGDFGDGGFKGEVGDRGFPGEKGTDGPPGP PGPRQMVKGDIGFPGTQGFTGPQGPSGFPGLKGQQGVSGISGPKGEEGLPGYHGQSGAKG EPGLTGPEGPRGHPGPPGPDGVPGQVGPPGPSSMEHGFLVTRHSQTVEVPYCPEGTRLIY DGYSLLYVQGNERSHGQDLGTAGSCLRKFSPMPFLFCNINNVCNFASRNDYSYWLTSPEP MPMSMAPITGESIKPFISRCSVCEAPAMVIAVHSQTIMIPACPHGWDSLWIGYSFVMHTS AGAEGSGQALASPGSCLEEFRSAPFFECHGRGTCNYYANSYSFWLATIEDDEMFTKPIPT TLKAGSLQTHISRCQVCMKRT NT seq 4926 nt NT seq  +upstreamnt  +downstreamnt atgctgctgccgcccggcgctctgctgctgctgctggcggctctctactcgagtgtggac ctgacaggggctgaggggggttgtggagcctcgtgtggaaaatgcgactgcagcggcgtg aagggggcaaagggggagcgtggatttcctggtctccaaggcaatatgggattcccagga atgcagggacatgaggggcccccggggccgatgggacccaagggagatctgggagagtct ggagctccaggaatgaaaggagtgcgaggccctcctggtcttccaggcttcccaggaaat ccaggactaccaggcatcaatggaaacgacggccccccgggtccatacggcatacccgga tgtaacgggaccaaaggggatagaggaagggacggcgttcctggttttctgggtccccaa gggtctcctggcatcgcaggaatacctgggatgaagggtgaccccggcggcgtgatggga atcgtccccttgaaaggagagagaggtttccccggcacacctggactacctggacagtct ggccttcgtgggccgaccgggcctccggggtcgcgaggatatccaggacttaaaggtgat agtggtccccctggccccccaggagaaaaaggtgacaggttggcctttgtgagtcagaaa ggggataagggtagccaaggagctcgaggccccccaggccccccaggacatcaagaagcg actggagagaccaccgtgcttgtgcctggacctccggggatccacggacaaaagggtgac aaaggagaacacggcttttgtctccctcatcagcacgggatcaaaggtgaaccgggtcaa cctgggtcagaaggtaaacgtggaaaggatggagaagatgggctgaagggagaaaaaggc tttcctggcactcttcctggatatcctggattaccaggtgaaaaaggagagagaggaccc cccggttatggaagtggtgaacctggcccccctggtacccctggcttccccggattaaat ggagaaaaaggttttcctggtccgcagggagaggccggtccacctggggctcacattgaa ggccctcggggagagaggggtcagaagggagaagtgggagaaaagggcgacactggcgta gagggagagtctcttcccggaccaccaggacaaccaggtctccgtggaccccccggaccg cccggacaaccgatcgacccgaatgcgtgtgacgttgagaagggaaatcctggcccagct ggaccccctgggttacaaggcgaagtgggacaaaaaggtgacaaaggagatacttgcctt cgctgtgaggtcgatggtttacctggattacctggaccccaaggcaataaaggagaacag ggaccacctggttctggtggcagcaaaggagagaaaggtggtcatggcttccccggacag tctggaagacctggtgtcccgggaactcctggtttgatgggatctcctggtgctgtaggg gagccaggcgatatttccgttgcacctggtctgaagggggataaaggtcttcctggtctc cccggtttagaaggacgatcagggcaagatggactgtcggggagagaaggcatcccaggt cttcctggtgtcaaaggcgaacctgccaaggagggcatcaagggtgaacgtggaccagat ggagagcctggtcttgttgggccgataggagaaagaggtcctccaggtgtaccaggcttt ggccagacaggagagcgtggagagaagggcagtcaggggagaccgggaacttctggagtt cctggatacccaggtccaaaaggtgaaccaggtaaaggtgttatcactccaggacctcaa ggagtacctggaccacgaggagacaatggcagacctggacttcaaggcgagataggtctg ccaggtgattcagggttgccaggttttcctggacaaaagggagagacaggaccaccggga attggatttccaggcccatcaggccaaaaaggaatcagtggaattccaggagcttcggga cttcccggagagccaggaaaaccaggaagggatggcgtgactggaaactctggtctacct ggccaaaagggtgaacctgggcggggtctcccaggtccaaaaggttcccaaggcccccct ggagttagcggtttcccaggagagaagggtaacattgggttccctggtgtccctggaaga gaagggacgtcaggaccaccgggacctcagggtcacaaaggtgagattgggacaccagga cttcccggccagattggccgagaaggtcctcctggaaaaggttcacctggagctcctgga ccagagggacccgctggagagcctggaccatatggtgggatcggttccaagggagataag ggcttcccaggtcttcctggtctcgacatgccgggccctcaaggcgagaagggaacccct ggtttcccaggaattccaggttttaaaggactccccggcccgccaggcttatcgggcaga gacggactcatcggaaacgaaggtcctaagggtgaaatgggtgtgatgggaacaccaggg tcacctggatatcctggacttccaggcaaccccggctctcctggcgagagaggggatcct ggtctcactggaccgagaggagaaatcggaggatttggcactaaaggtgaaaggggatct caaggtagccctggacctcctgggaatatgtctgagaccgaaatggtgaacatgaggggg gagaagggcaaccctggagacccaggtgtgcgcggcgacaccggagagaagggccacatc gggattgcaggggacccaggaatgcctggcaaagacggagaacctggattacctggaaaa ccgggtgaaaagggagacctgggctatcccggagagcccggcagtctgggacaaccggga acgaaaggcagtgtgggcgagatgggagtgccaggtccggtcggccccaaaggtacgaaa ggagatagtggcacaccaggtcatccgggattccaaggtacgggcggtgacaaaggagac cagggaacggctggagagccgggcatcggggttccaggatttccgggggagaagggtctg agcggccagccgggattcccggggacacctggagagaagggtgagaaaggttacggggga atgcccggaaagcccggacatgaaggatccaagggagacaaaggaagcattggctttcca ggtcaggcaggcagaccgggagagaagggcggccctgggcttccagggtctgcaggagag gccggtcatgacggccgtcccggtgaaggtggcctgcagggacccccgggaccccgtgga gagaagggggaggcgggtgtggacggtattcctggatctacgggggagagaggagaccca ggtttatctggtcagggtttcactgggccacctggagatctcggtgtcaaaggtgacaaa ggtagtcctggtttccccggcacccccggccacccaggtgtccctgggatcaaaggggac aagggacttccaggccagcagggagtccagggagagaccggagagcaaggtctccaaggt gtcgcgatggaaggccccaaaggagagaggggagatacgggacctccgggccaagcaggt gtccgaggagaaccgggtccgggtggcctgtcgggtcgagacggtctgaagggagacaaa ggtgaccagggtctccccggtttccagggggagacgggacgaaagggcgacttcggagct cctgggatgcctggacaatccggccttccaggtatcgacgggcagaagggagagcgagga ttacagggcgttcctggcttcccaggtccaaaaggagacttcggggacggtggattcaaa ggagaagttggagacagaggattccccggagaaaaaggcactgacggtccccctggtccc cccggcccccggcagatggtcaagggagatatcggcttccctggaactcaaggtttcacg ggacctcaaggcccgtcggggttccccggactgaagggacaacaaggtgtgagcggtatt tcagggcctaaaggtgaagaaggtctccctggataccacggtcagtcgggagccaaagga gagcccggtctgacggggccggaaggaccgagaggacatcctggccccccgggacccgac ggtgttccaggtcaagtgggtccaccaggcccctcctccatggagcacggtttcctggtg acgcgccacagccagacggtggaggttccctactgccccgaagggacccggctcatatac gacggctactcgctgctgtacgtgcagggcaacgagcgctctcatggacaggacttaggt acggccggcagctgtctcaggaagttcagccctatgcccttcctattctgcaacatcaac aacgtgtgcaacttcgcctcccgcaacgactactcgtactggctgacttccccggagccc atgcccatgagcatggcccccatcacgggggagagcatcaagcccttcatcagcaggtgc tccgtgtgtgaggcgccggccatggtgatcgccgtgcacagccagaccatcatgatcccg gcctgccctcacggctgggactcgctgtggatcggctactccttcgtcatgcacaccagc gccggcgccgagggttcgggccaggctctggcctcccccggctcctgcctggaggagttc cgcagcgctcccttcttcgagtgtcacggccgaggaacctgcaactactacgccaactcc tacagcttctggctcgccaccatcgaggacgacgagatgtttacgaaacccatccccacc acgctgaaagcgggcagcctccaaactcacataagccgctgtcaggtgtgcatgaagagg acataa

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