Cololabis saira (Pacific saury): 133446243
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Entry
133446243 CDS
T09849
Name
(RefSeq) integrin alpha-4-like
KO
K06483
integrin alpha 4
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04510
Focal adhesion
csai04512
ECM-receptor interaction
csai04514
Cell adhesion molecule (CAM) interaction
csai04517
IgSF CAM signaling
csai04518
Integrin signaling
csai04672
Intestinal immune network for IgA production
csai04810
Regulation of actin cytoskeleton
csai04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133446243
04514 Cell adhesion molecule (CAM) interaction
133446243
04517 IgSF CAM signaling
133446243
04518 Integrin signaling
133446243
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133446243
09142 Cell motility
04820 Cytoskeleton in muscle cells
133446243
04810 Regulation of actin cytoskeleton
133446243
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
133446243
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csai04147
]
133446243
04515 Cell adhesion molecules [BR:
csai04515
]
133446243
04090 CD molecules [BR:
csai04090
]
133446243
Exosome [BR:
csai04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
133446243
Exosomal proteins of other cancer cells
133446243
Cell adhesion molecules [BR:
csai04515
]
Integrins
Integrin alpha subunits
133446243
CD molecules [BR:
csai04090
]
Proteins
133446243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_1
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_3
FG-GAP_3
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
133446243
NCBI-ProteinID:
XP_061580217
LinkDB
All DBs
Position
6:48844385..48890407
Genome browser
AA seq
1031 aa
AA seq
DB search
MRSSGVGMLVQVLVLVQVLVPQASGYSLDEEHSLEFGGPQGSMFGYSVLLHQHRDHHWLV
VGAPVANVSSRPSVRSPGAVFRCNITAEDRSCSHMNTEVLSCGKTCEAESDDQWLGVSLS
KQPGGHGGHGGHGGHVMACAHRWKNVYYSRKDSQKNKLPNGLCYRFSSDLEHSSPIIPCY
RDYQTRFGEDYGSCQAGMSNVLTEDLIVMGAPGTSYWTGSVLVYNATGGVMSVYLDDQTG
AVTFGSYLGYSVGAGHFLGPASVEVVGGAPQYNQRGKVFIFTVDNVMLRVVSEVSGTELG
SYFGSSVCVVDLNADGLSDLLVGAPMATGTAREEGRVHVYINQGQAKLEEAAFTLSGSNA
VAARFGETMADLGDLDDDGYPEIAVGAPQENDLRGAVYIYNGRADGVSATPSQRISGSSL
GRDLRMFGQSLSSGVDVDANGYQDVAVGAFLSDSVVVLRTRPVIQLRATLALPDRIDQNQ
LLCRHQRTPTVCFNVTVCFSVTSRHFRGAIELQYNLTSDLLHKPIFPHRFYFSGNGSSNS
TRGVVKARPGRLVCATHLAYQRKDVKDVYTPVQFEVSYGLRDRKTSRLSSETFPSLKPIL
QQSHAQRNAITNQTQFARSCSQVNCSTDMKLSGQLELPQRRAFFPLGSGQTMTLTTLLSN
SGDDAFLPRLTLTLPSYIHYIKVLQNDDLAVSCEVTEEDGATEVSVDCSLSSLVLPAQSQ
LNISFLLDVNRNSTPGDAVVHVSTGSDIFEKEEYLHDNAVRLVLPLRYGVNVNIHGFVSP
TSFVFGDEDVIPAECYPEKFNYTYKVLNSGPSRSRETVVVVSLPKILAPHRHRLLQVVDW
KASQGECGISDRTVPVLDDCVVPQASVLQQLVFFFSETSTRRMFCGRQDELCEQLVCRLG
NLEPGGDASIQLEVKLNPAVLLQAPGRHGIMRLESTAVMSPPSDPHTVLVEEENGFTQVD
VEAVYTQKPSMAVKIFIIVVSLVAGLLILAALIWCLWKAGFFKRTYQKQEEEFKRDSWDY
VPKVNKRESNT
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgcgctcgtcgggggtcgggatgctggtccaggtcctggtcctggtccaggtcctggtc
ccgcaggcttcaggatacagcctggatgaggaacacagtctggagttcggcggacctcag
ggctccatgttcggatactccgtcctgctgcaccaacacagagatcaccactggttggtg
gtcggagctccggtggccaacgtgtcgtccaggccgtcggttcgatccccaggagccgtt
ttcagatgcaacatcacggcggaggatcggagctgcagccacatgaacaccgaggtgttg
agttgtgggaagacgtgtgaagctgagagcgatgaccagtggctcggcgtcagtctgtcc
aaacaacccggaggacacggaggacacggaggacacggaggacacgtcatggcatgtgct
caccgctggaagaacgtctactactcaagaaaagacagtcagaaaaacaagctgcctaac
ggactgtgttaccgctttagcagtgacctggaacactccagtcccatcatcccctgctac
agagactaccagacccggtttggggaggattacgggtcttgccaggcaggaatgtccaac
gtcctgacggaggatctgatcgtcatgggggccccggggacgtcctactggaccggctcc
gtcctggtctacaacgcgaccggcggagtgatgtcggtgtacctggacgaccagaccgga
gccgtcaccttcgggagctacctgggttactcggtgggagccggtcacttcctgggtcct
gccagcgtggaggtcgtgggcggagctcctcagtacaaccagagggggaaggtcttcatc
ttcacagttgacaacgtcatgctgcgtgtggtttccgaggtgtctggaacagaactgggc
tcgtacttcggctccagcgtgtgtgtggtggacctgaacgctgacggcctgtcggacctt
ctggtcggggctccgatggccacggggacggcccgggaggagggacgggtccacgtctac
atcaaccagggccaggccaagctggaggaggcagcgttcacgctgagcggctccaacgcc
gtggcggcgcggttcggagagaccatggccgacctgggagacctggacgacgacggttac
ccagagatcgccgtcggggccccccaggagaacgacctccgaggagccgtctacatctac
aacggcagagcagacggagtttcagcgactccgtcgcagaggatcagcggctcgtccctc
ggccgggacctgaggatgttcggacagtctctgagctccggcgtggacgtggacgccaac
ggctaccaggacgtggcggtcggagccttcctgtcagactctgtcgtggttctcaggacc
cggccggtgatccagctgagggcgaccctggcgctgcccgaccggatcgaccagaaccag
ctgctgtgccgacaccagcggaccccgaccgtctgcttcaacgtcaccgtctgcttcagc
gtgacgtccagacacttcagaggagccatagaacttcagtataacctgacctctgacctc
cttcacaaacccatcttccctcatcgattctacttcagcggaaacgggtcgtccaacagc
accaggggggtcgtgaaggcccggcccggccggctggtctgtgctacacacctggcctat
cagaggaaagacgtgaaggacgtttacactccggtccagttcgaggtttcctacggactc
agagacagaaagaccagcagactctcctccgaaaccttcccttcgctgaagcccatcctg
cagcagagccacgcgcagcgcaacgccatcacgaaccagacccagttcgctcggtcctgc
tctcaggtgaactgctcaaccgacatgaagctgtcgggtcaactggagctgccgcagcgg
cgggccttcttccctctgggctcgggtcagacgatgacgctgacgacgctgctgtccaac
tccggggacgacgccttcctgccgcggctaacgctaacgctgcccagctacatccactac
atcaaggttctgcagaacgacgacctggcggtcagctgtgaggtcacagaggaagacggc
gctacagaagtcagtgtggactgcagcctcagcagcctggtcctgccggcccagtcccag
ttgaacatcagtttcctgctggacgtgaaccggaacagcacgccaggagacgccgtggtc
cacgtcagcaccggcagtgacatctttgagaaggaagagtatctccatgacaacgccgtc
agactggtcctcccgctcagatacggcgttaacgtgaacatccacgggttcgtgagtccg
acctcgttcgtgttcggagacgaagacgtgattcctgctgagtgctacccggagaagttc
aactacacctacaaggttctgaactcgggtcccagcaggtccagagaaaccgtggtcgtg
gtctcacttcccaagatcctggcgccgcatcgtcaccgcctgctgcaggtggtggactgg
aaggcgtctcagggagaatgtgggatcagcgaccggacggttccggttctggacgactgt
gtcgtcccccaggcctccgtcctccagcagctggtcttcttcttctccgagacctccacc
cgcaggatgttctgcggccggcaggatgagctgtgtgagcagctggtctgtcgccttggt
aacctggaaccaggaggagacgcttccatccagctggaggtcaagctgaacccggcggtg
ctgctgcaggctccgggtcgtcatggaatcatgaggctggagagcaccgccgtgatgtct
cctccctcagatcctcacaccgtcctggtggaggaggagaacggcttcactcaggtggac
gtggaggccgtttacacccagaaaccctccatggccgtgaagatcttcatcatcgtggtc
agtctggtggccggactgctgatcctggcggcgctgatctggtgtctgtggaaggccggg
ttcttcaagagaacctaccagaagcaggaggaggagtttaagagagacagctgggactac
gttcccaaagtgaacaagagagagagcaacacctga
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