KEGG   Cololabis saira (Pacific saury): 133446243
Entry
133446243         CDS       T09849                                 
Name
(RefSeq) integrin alpha-4-like
  KO
K06483  integrin alpha 4
Organism
csai  Cololabis saira (Pacific saury)
Pathway
csai04510  Focal adhesion
csai04512  ECM-receptor interaction
csai04514  Cell adhesion molecule (CAM) interaction
csai04517  IgSF CAM signaling
csai04518  Integrin signaling
csai04672  Intestinal immune network for IgA production
csai04810  Regulation of actin cytoskeleton
csai04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:csai00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    133446243
   04514 Cell adhesion molecule (CAM) interaction
    133446243
   04517 IgSF CAM signaling
    133446243
   04518 Integrin signaling
    133446243
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    133446243
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    133446243
   04810 Regulation of actin cytoskeleton
    133446243
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    133446243
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:csai04147]
    133446243
   04515 Cell adhesion molecules [BR:csai04515]
    133446243
   04090 CD molecules [BR:csai04090]
    133446243
Exosome [BR:csai04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   133446243
  Exosomal proteins of other cancer cells
   133446243
Cell adhesion molecules [BR:csai04515]
 Integrins
  Integrin alpha subunits
   133446243
CD molecules [BR:csai04090]
 Proteins
  133446243
SSDB
Motif
Pfam: Integrin_A_Ig_1 FG-GAP Integrin_A_Ig_2 Integrin_A_Ig_3 FG-GAP_3 Integrin_alpha
Other DBs
NCBI-GeneID: 133446243
NCBI-ProteinID: XP_061580217
LinkDB
Position
6:48844385..48890407
AA seq 1031 aa
MRSSGVGMLVQVLVLVQVLVPQASGYSLDEEHSLEFGGPQGSMFGYSVLLHQHRDHHWLV
VGAPVANVSSRPSVRSPGAVFRCNITAEDRSCSHMNTEVLSCGKTCEAESDDQWLGVSLS
KQPGGHGGHGGHGGHVMACAHRWKNVYYSRKDSQKNKLPNGLCYRFSSDLEHSSPIIPCY
RDYQTRFGEDYGSCQAGMSNVLTEDLIVMGAPGTSYWTGSVLVYNATGGVMSVYLDDQTG
AVTFGSYLGYSVGAGHFLGPASVEVVGGAPQYNQRGKVFIFTVDNVMLRVVSEVSGTELG
SYFGSSVCVVDLNADGLSDLLVGAPMATGTAREEGRVHVYINQGQAKLEEAAFTLSGSNA
VAARFGETMADLGDLDDDGYPEIAVGAPQENDLRGAVYIYNGRADGVSATPSQRISGSSL
GRDLRMFGQSLSSGVDVDANGYQDVAVGAFLSDSVVVLRTRPVIQLRATLALPDRIDQNQ
LLCRHQRTPTVCFNVTVCFSVTSRHFRGAIELQYNLTSDLLHKPIFPHRFYFSGNGSSNS
TRGVVKARPGRLVCATHLAYQRKDVKDVYTPVQFEVSYGLRDRKTSRLSSETFPSLKPIL
QQSHAQRNAITNQTQFARSCSQVNCSTDMKLSGQLELPQRRAFFPLGSGQTMTLTTLLSN
SGDDAFLPRLTLTLPSYIHYIKVLQNDDLAVSCEVTEEDGATEVSVDCSLSSLVLPAQSQ
LNISFLLDVNRNSTPGDAVVHVSTGSDIFEKEEYLHDNAVRLVLPLRYGVNVNIHGFVSP
TSFVFGDEDVIPAECYPEKFNYTYKVLNSGPSRSRETVVVVSLPKILAPHRHRLLQVVDW
KASQGECGISDRTVPVLDDCVVPQASVLQQLVFFFSETSTRRMFCGRQDELCEQLVCRLG
NLEPGGDASIQLEVKLNPAVLLQAPGRHGIMRLESTAVMSPPSDPHTVLVEEENGFTQVD
VEAVYTQKPSMAVKIFIIVVSLVAGLLILAALIWCLWKAGFFKRTYQKQEEEFKRDSWDY
VPKVNKRESNT
NT seq 3096 nt   +upstreamnt  +downstreamnt
atgcgctcgtcgggggtcgggatgctggtccaggtcctggtcctggtccaggtcctggtc
ccgcaggcttcaggatacagcctggatgaggaacacagtctggagttcggcggacctcag
ggctccatgttcggatactccgtcctgctgcaccaacacagagatcaccactggttggtg
gtcggagctccggtggccaacgtgtcgtccaggccgtcggttcgatccccaggagccgtt
ttcagatgcaacatcacggcggaggatcggagctgcagccacatgaacaccgaggtgttg
agttgtgggaagacgtgtgaagctgagagcgatgaccagtggctcggcgtcagtctgtcc
aaacaacccggaggacacggaggacacggaggacacggaggacacgtcatggcatgtgct
caccgctggaagaacgtctactactcaagaaaagacagtcagaaaaacaagctgcctaac
ggactgtgttaccgctttagcagtgacctggaacactccagtcccatcatcccctgctac
agagactaccagacccggtttggggaggattacgggtcttgccaggcaggaatgtccaac
gtcctgacggaggatctgatcgtcatgggggccccggggacgtcctactggaccggctcc
gtcctggtctacaacgcgaccggcggagtgatgtcggtgtacctggacgaccagaccgga
gccgtcaccttcgggagctacctgggttactcggtgggagccggtcacttcctgggtcct
gccagcgtggaggtcgtgggcggagctcctcagtacaaccagagggggaaggtcttcatc
ttcacagttgacaacgtcatgctgcgtgtggtttccgaggtgtctggaacagaactgggc
tcgtacttcggctccagcgtgtgtgtggtggacctgaacgctgacggcctgtcggacctt
ctggtcggggctccgatggccacggggacggcccgggaggagggacgggtccacgtctac
atcaaccagggccaggccaagctggaggaggcagcgttcacgctgagcggctccaacgcc
gtggcggcgcggttcggagagaccatggccgacctgggagacctggacgacgacggttac
ccagagatcgccgtcggggccccccaggagaacgacctccgaggagccgtctacatctac
aacggcagagcagacggagtttcagcgactccgtcgcagaggatcagcggctcgtccctc
ggccgggacctgaggatgttcggacagtctctgagctccggcgtggacgtggacgccaac
ggctaccaggacgtggcggtcggagccttcctgtcagactctgtcgtggttctcaggacc
cggccggtgatccagctgagggcgaccctggcgctgcccgaccggatcgaccagaaccag
ctgctgtgccgacaccagcggaccccgaccgtctgcttcaacgtcaccgtctgcttcagc
gtgacgtccagacacttcagaggagccatagaacttcagtataacctgacctctgacctc
cttcacaaacccatcttccctcatcgattctacttcagcggaaacgggtcgtccaacagc
accaggggggtcgtgaaggcccggcccggccggctggtctgtgctacacacctggcctat
cagaggaaagacgtgaaggacgtttacactccggtccagttcgaggtttcctacggactc
agagacagaaagaccagcagactctcctccgaaaccttcccttcgctgaagcccatcctg
cagcagagccacgcgcagcgcaacgccatcacgaaccagacccagttcgctcggtcctgc
tctcaggtgaactgctcaaccgacatgaagctgtcgggtcaactggagctgccgcagcgg
cgggccttcttccctctgggctcgggtcagacgatgacgctgacgacgctgctgtccaac
tccggggacgacgccttcctgccgcggctaacgctaacgctgcccagctacatccactac
atcaaggttctgcagaacgacgacctggcggtcagctgtgaggtcacagaggaagacggc
gctacagaagtcagtgtggactgcagcctcagcagcctggtcctgccggcccagtcccag
ttgaacatcagtttcctgctggacgtgaaccggaacagcacgccaggagacgccgtggtc
cacgtcagcaccggcagtgacatctttgagaaggaagagtatctccatgacaacgccgtc
agactggtcctcccgctcagatacggcgttaacgtgaacatccacgggttcgtgagtccg
acctcgttcgtgttcggagacgaagacgtgattcctgctgagtgctacccggagaagttc
aactacacctacaaggttctgaactcgggtcccagcaggtccagagaaaccgtggtcgtg
gtctcacttcccaagatcctggcgccgcatcgtcaccgcctgctgcaggtggtggactgg
aaggcgtctcagggagaatgtgggatcagcgaccggacggttccggttctggacgactgt
gtcgtcccccaggcctccgtcctccagcagctggtcttcttcttctccgagacctccacc
cgcaggatgttctgcggccggcaggatgagctgtgtgagcagctggtctgtcgccttggt
aacctggaaccaggaggagacgcttccatccagctggaggtcaagctgaacccggcggtg
ctgctgcaggctccgggtcgtcatggaatcatgaggctggagagcaccgccgtgatgtct
cctccctcagatcctcacaccgtcctggtggaggaggagaacggcttcactcaggtggac
gtggaggccgtttacacccagaaaccctccatggccgtgaagatcttcatcatcgtggtc
agtctggtggccggactgctgatcctggcggcgctgatctggtgtctgtggaaggccggg
ttcttcaagagaacctaccagaagcaggaggaggagtttaagagagacagctgggactac
gttcccaaagtgaacaagagagagagcaacacctga

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