Cololabis saira (Pacific saury): 133446947
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Entry
133446947 CDS
T09849
Symbol
cdx1a
Name
(RefSeq) homeobox protein CDX-1a
KO
K09312
homeobox protein CDX1/4
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csai03000
]
133446947 (cdx1a)
Transcription factors [BR:
csai03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
133446947 (cdx1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
HTH_NDX
Motif
Other DBs
NCBI-GeneID:
133446947
NCBI-ProteinID:
XP_061581167
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All DBs
Position
7:24876541..24882310
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AA seq
208 aa
AA seq
DB search
MFPNSLSSQYIPPGYDFSGSYEPSAGPWGAVYPQREEFPYSFPGSSPCAGQLSFSPAELS
CAPSAAGGGSLPPYSFMSGQDPFSSRRRPEPTRHTLSGGKTRTKDKYRVVYTDHQRLELE
KEFQYNRYITMRRKSELSVTLSLSERQVKIWFQNRRAKERKVNRKKLQQSQQASTTTPTP
PVLAGHTDVTTSPSTRSNMMSDLKAEDY
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgttccccaactccctcagcagccagtacatcccgcccgggtatgacttcagcgggtcc
tatgagccgtcggcgggcccctggggggccgtgtacccgcagcgggaggagttcccctac
agcttcccggggtcgagcccctgcgccggccagctcagcttcagccccgcggagctgagc
tgcgccccctcggccgctggaggggggtctctgcccccctacagcttcatgtctgggcag
gaccccttcagctccaggaggagacctgagcccaccagacacacactttcaggagggaag
acccggaccaaggacaagtacagggtggtgtacactgatcaccaacggctggagttggag
aaggagttccagtacaaccgctacatcaccatgaggaggaagtccgagctgtcagtgaca
ctcagcctttctgagagacaggtgaagatatggtttcagaacagacgtgccaaagagagg
aaggttaacaggaagaagctgcagcaatcccaacaggcctccaccacgactcccactccg
cccgtactggctggacacactgacgtcaccacgagccccagcaccagaagcaacatgatg
tcggacttaaaagcagaggactactag
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integrated database retrieval system
