Cololabis saira (Pacific saury): 133446980
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Entry
133446980 CDS
T09849
Symbol
etf1a
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-like
KO
K03265
peptide chain release factor subunit 1
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
133446980 (etf1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csai03019
]
133446980 (etf1a)
03012 Translation factors [BR:
csai03012
]
133446980 (etf1a)
Messenger RNA biogenesis [BR:
csai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
133446980 (etf1a)
Translation factors [BR:
csai03012
]
Eukaryotic type
Release factors
133446980 (etf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
133446980
NCBI-ProteinID:
XP_061581227
LinkDB
All DBs
Position
7:25750894..25757481
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AA seq
443 aa
AA seq
DB search
MADDPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTAS
NIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPI
NTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPKKH
GRGGQSALRFARLRMEKRHNYVRKVAETAVQLFVSNDKVNVAGMVLAGSADFKTELSQSD
MFDPRLQAKVLKLVDISYGGENGFNQAIELSAEVLSNVKFIQEKKLIGRYFDEISQDTGK
YCFGVEDTLKALEMGAVEILIVYENLDTMRYVLRVHGAESNGLENDEKTLYLTPEQEKDK
SHFTDKETGQEHELIESMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILR
YRVDFQGMEYQGEDDEFFDLDDY
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgacccgagcgcggcggacaggaacgtggagatctggaagatcaagaagctg
atcaaaagtttggaagctgcccgcggtaatggcaccagtatgatctcattgatcatccct
ccaaaggaccagatatcaagagtggccaagatgttggctgatgagttcggaaccgcttcc
aacattaagagtcgagttaacaggctgtctgtacttggtgctatcacctctgtacagcaa
agactaaaactttacaacaaggtgccacccaatggtttagttgtgtattgtggcaccatt
gtgacagaggaaggcaaggagaagaaagtcaacattgactttgagccttttaaaccaatc
aacacctctctgtacctctgtgacaacaagtttcataccgaggcattgacagctctactc
tctgatgacagcaagtttggctttattgtgattgatggtagtggggcactctttggcacg
cttcaaggcaacaccagggaggtgctgcacaagttcactgtggacctacccaagaagcat
ggcagaggaggacaatctgcactccgctttgctcgtttgagaatggagaagagacacaac
tatgtgagaaaagtagctgagaccgctgtccagctctttgtttccaatgacaaagttaat
gtagcgggaatggtcttggctggctctgctgatttcaagactgaactcagccagtctgac
atgtttgacccaagattacaggccaaggttctgaagctggtagacatctcgtacggagga
gagaatggtttcaaccaggctatcgagctctccgctgaggttctttcaaatgtcaaattt
atccaagagaaaaagctcatagggaggtactttgatgagatcagtcaagatacaggaaaa
tattgttttggagtggaggacacactcaaagctctggaaatgggagcagtggagatcctt
atagtctatgagaacttggacaccatgcgttacgttctacgtgtgcatggagcagagagc
aatggcttagagaatgatgagaaaactctgtacttgacgccagagcaagagaaagacaag
tctcacttcacagacaaggaaacggggcaggaacatgagcttatcgagagcatgcctctg
ttggagtggtttgcaaacaactacaagaaatttggagcgacgcttgaaatagtaacagac
aaaagccaggaagggtcccagtttgtcaaaggctttggaggcattgggggtatcttgcgg
tacagggtggatttccagggcatggaataccaaggagaggacgatgagttctttgatttg
gatgactactag
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