Cololabis saira (Pacific saury): 133456313
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Entry
133456313 CDS
T09849
Name
(RefSeq) beta-1,4-galactosyltransferase 4-like
KO
K07969
beta-1,4-galactosyltransferase 4 [EC:
2.4.1.90
2.4.1.275
2.4.1.-]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai00533
Glycosaminoglycan biosynthesis - keratan sulfate
csai00601
Glycosphingolipid biosynthesis - lacto and neolacto series
csai01100
Metabolic pathways
Module
csai_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00533 Glycosaminoglycan biosynthesis - keratan sulfate
133456313
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
133456313
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
csai01003
]
133456313
Enzymes [BR:
csai01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.90 N-acetyllactosamine synthase
133456313
2.4.1.275 neolactotriaosylceramide beta-1,4-galactosyltransferase
133456313
Glycosyltransferases [BR:
csai01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
133456313
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_7N
Glyco_transf_7C
Glyco_tranf_2_2
Motif
Other DBs
NCBI-GeneID:
133456313
NCBI-ProteinID:
XP_061590770
LinkDB
All DBs
Position
12:13879101..13885508
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AA seq
347 aa
AA seq
DB search
MWFCLAVGDHLYRGRYFLLSFLLVLVLVSIAIFSGETLKIIPVYPATMQTRKDNLMDQPD
NRTSTPDQLYIPTQKGECPVESPLLQGLVKPSFESSLTLKNVENENKGVSDGEYEPSGCT
ARQSVAIIIPHRRRETHLIYFLYHLHPFLQRQQLHYAIYVVNQAGDATFNRAKLMNVGYL
EALKDHSWDCFIFHDVDLIPENDKNVYICDDNRPKHLIFGKNSTGYQLPYPTNFGGVTAL
TREQFQKVNGFPNIYWGWGGEDDDLYTRVRLQKMKIVRPPANVARYTMMFHKRDSGNKKN
PNRAWLMQKTHSLMKTDGINSCSYTTLSVERLLLYVNVTVDIGKPQS
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgtggttctgtttagccgttggcgatcatttgtaccgagggagatattttttattaagc
tttctcttagtgttggtcctggtttcgatagccatcttctctggtgaaactttgaaaatc
attccggtttaccctgccacaatgcaaacaagaaaagacaatctgatggatcaacctgac
aacaggacttcaacacctgatcagctttacattccaacacaaaaaggcgaatgcccagtg
gagtctccattgctgcagggactcgtgaagccgtcctttgagtcttctctgacactgaag
aatgtagaaaatgagaacaaaggagtgtctgatggagagtatgagccctcgggctgtaca
gcgcggcagagcgtagctatcatcatcccacatcgcaggcgagaaacccacctcatctac
ttcctgtatcacctgcacccatttctacagagacagcaactacactatgccatttatgtc
gtcaaccaggctggcgatgcaacttttaatcgagccaagctcatgaatgtagggtatttg
gaggcgctgaaggaccacagttgggactgcttcatcttccatgatgtggacctgattcct
gaaaatgacaagaatgtatatatctgcgacgacaatcggcccaaacacctgatatttggc
aagaatagcacaggataccagctgccttacccaaccaactttggtggagttaccgctttg
accagagaacagtttcaaaaagtgaatggttttccaaacatttactggggttggggtggg
gaagatgatgacctttacacaagggttcggctgcagaaaatgaagattgtgcggccgccc
gctaatgtagcccgctataccatgatgtttcacaagcgagactctggcaataagaaaaac
ccaaatagggcgtggctcatgcaaaaaacacattctctgatgaaaacggatggaatcaac
agctgctcatatacaactctgtcagttgaaagattgctgctttatgtaaatgttactgtg
gacatcgggaagccgcagagctga
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