Cololabis saira (Pacific saury): 133457177
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Entry
133457177 CDS
T09849
Symbol
cngb1a
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-3 isoform X1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
133457177 (cngb1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csai04040
]
133457177 (cngb1a)
Ion channels [BR:
csai04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
133457177 (cngb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
PRIMA1
Motif
Other DBs
NCBI-GeneID:
133457177
NCBI-ProteinID:
XP_061592117
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Position
2:complement(3589552..3673579)
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AA seq
1247 aa
AA seq
DB search
MLNWVVKVVPQPPEPPTKKADDPKEEKKDVTPPPVPAPSPAPEKKVTFQDECKNEAPKAD
NPKQEAPAPAGNGPVPSCQAGVLTWISSALPHPTVPPNLTRANSTTKEEAATSSKPEDEK
GMIAWISHGLEKVVPQPELRSKESPPPEPQAEVRPAAPPAAPPPAPAPAPAPAAPKPPTV
TEPENEAETTKQPNMMGWIVNGFSSMLPQPVPKLDTGGDEVQNVSIIQKKTDLVLEDVEQ
EAKQEKEPPNKETQLPKKETDDAVDQLTPMVASIKKEAGEAVLAQMEERLQKERLEAARV
AEDMARKAAAEAVRQLEVEHAAKIVIETIPEANEQLPNILEEENEDDPELQNLQEDSEDN
NLEDNKVMEEDTNSTVEKQKTIECMVDVCTAEDVPEERTESPPEVTESEPAAKLTPSSTD
VEPASERRDLESPVTQQPEKAQASEHSEPSEPSEPAEPSEQTSTAPSEEDPGCGESGSKD
VAEASLLQVEGRNIPQIITTPEPEANLLIVPALSRVGDVSEDDEELVKASQGDLLTADDE
LRPQSAASVCSFVVHERLSELVKLFKGRTEYQKDRLVDADESEEESPKPSPAKAPPAPPP
PPPPPAGEEEKDAPEEAAEEEEKKEEEPLLEFMGYKVKIPKLPKLPPLPGWLRAILEYRF
PSSIDPFTDLIYVLWLFCVVMAWNWNVWLIPVRWAFPYQTDENVHLWLLADYTCDFIYIL
DILVFQPRLQFVRGGDIVSTKKDMRENYMTTERFKMDVISLFPMDVFYVFTGVNSLLRFP
RLLKYMAFFEFNDRMEAVMKKAYIYRVLRTSTYLLYSLHINACLFYWGSDYEGLGSTKWV
YNGKGNAYIRCYYFAVKTLITIGGLPDPTTVFEITFQLINYFVGVFAFSIMIGQMRDVVG
AATAGENYYRACMDSTVKYMNSYHIPKDVQNRIKTWFDYTWKIQGMLDEQELLVQLPDKM
RLDIAVDVNYSIVSKVALFQGCDRQMVFDMLTRLKSVVYLPGDFVCKKGEIGREMYIIKQ
GEVQVVGGPDLQTVFVTIRAGSVFGEISLLAGGGGNRRTANVKAHGFANLFILDKKDLAE
ILVHYPESQKLLRKKAKTMLTKDAKPEVAAGKEQPEVIPPRPDTPEMFKAALKVTEQAGI
EGTFAKLKKAYKPFEEGGEEEAQGPTRISPMPPPSPMHRRSPVPRTLEPEDGDEAVAETA
DSSVIIRMTPRHKGEELLSVEVSPREGEEAKKEEQKEKKKKKEKKKK
NT seq
3744 nt
NT seq
+upstream
nt +downstream
nt
atgttgaactgggtagtcaaagtcgttcctcagccgcccgagcctccaaccaaaaaggct
gacgatccgaaggaggagaaaaaagatgtgaccccaccccctgtgccagctccatcccct
gctcctgagaagaaagtgacgtttcaagacgagtgcaaaaatgaggctccaaaggcggac
aaccccaagcaggaggcaccagctcctgcaggaaatgggccggtgccgagctgtcaggcc
ggggtgctgacgtggatcagcagtgctctcccccatcccaccgtcccccccaacctgacc
cgggccaactccaccaccaaggaggaagctgcaacatccagtaaacctgaagacgaaaaa
gggatgatcgcctggatctctcacggtttggagaaagtcgttcctcagcccgagttgagg
agcaaagagtcgccgccccctgagcctcaggccgaggtccgcccagcagctcctccagca
gctcctcctcctgctcctgctcctgctcctgctcctgctgctcctaaaccacccaccgtg
acggagcctgagaatgaagcagaaaccaccaaacaaccaaatatgatgggatggatcgtg
aacggcttcagcagcatgttgcctcagcctgtacccaagctagacacgggaggcgacgag
gtccagaatgtcagcatcattcagaagaagaccgacctggtgctcgaggacgtggagcag
gaggccaaacaggagaaagagcctccgaacaaagagacccagctcccgaagaaggagact
gatgacgcagtggatcaactgactcctatggtggccagcatcaagaaggaagctggagaa
gctgtcctagctcaaatggaggaaaggctgcagaaggagcgtctggaggcggcccgagtt
gctgaggacatggccaggaaggcagcagcagaggcagtccgacagctggaggtggagcat
gcagctaagattgtcatagaaacgataccagaggccaatgagcaattgcccaacatcctg
gaggaggagaacgaggatgatcctgagttgcaaaacctgcaggaagacagtgaagacaat
aatctggaggataacaaagtaatggaggaggatacaaacagcactgttgagaaacagaaa
acgattgagtgtatggtggacgtctgcacggccgaagacgttcctgaagaaaggacagag
tctcctccagaggtaacggaatcagaaccagcagcaaaactcacgccgtcgtctacagac
gtagagccggcgtcagagaggagggacctggagagtccggtcacccagcaaccagaaaag
gcccaggcctctgagcactccgagccctcggagccctcggagcccgctgagccctctgag
cagaccagcacagcaccttcagaagaagatcctggatgtggagagagcggcagtaaagat
gtggctgaagcttcgctgctccaggtggagggccggaacatcccacaaattatcaccacc
ccagaaccggaggccaaccttctgattgtgccagcgctcagccgtgtgggtgatgtgtct
gaggatgatgaggagctggtgaaggccagtcagggagatctgctgactgctgacgatgag
ctgcgtcctcagtccgccgccagcgtctgcagctttgtggtgcacgagcgtctgagcgag
ctcgtcaagctcttcaaaggtcggacggaatatcagaaagaccggctggtggacgctgat
gagtccgaagaggagagccccaaaccctccccagccaaagctccaccagcgcctccacct
ccacctccaccgccagcaggagaggaggagaaggacgcacctgaggaagcagcagaggaa
gaggagaagaaggaagaggagcccctgttagaatttatgggctataaagtgaaaattccc
aaactgcccaaacttccaccgttgcccggctggctgagagccatcctggagtatcgcttc
ccctccagcatcgacccgttcactgatctgatctacgtcctctggctgttctgcgtggtg
atggcgtggaactggaatgtgtggttgatcccagtgcgctgggcattcccctatcagaca
gacgagaacgtccacctgtggctgctggccgactacacgtgtgacttcatctacattctc
gacatcctggtcttccagcccagactgcagtttgtccgcggaggagacattgtgagcact
aagaaagacatgagagaaaattacatgaccaccgagaggttcaagatggacgtcatcagt
ctgtttcccatggatgtcttctacgtcttcactggagtgaactctctgctgaggttccct
cgtctgctgaagtacatggctttctttgagttcaacgacaggatggaagctgtgatgaag
aaagcctacatctacagggtgctccggacctccacctacctgctgtactctctccacatc
aacgcctgtctcttctactggggctctgactatgagggactgggatccaccaagtgggtc
tacaatggaaaaggaaacgcttacatccgatgttactactttgctgtgaagacgctcatc
accatcggaggcctgccggaccccaccaccgtctttgagatcaccttccagctcatcaac
tacttcgttggcgtatttgctttctccatcatgatcggtcagatgagggacgttgtcgga
gcagcaacagcaggagagaactactaccgggcttgtatggacagcaccgtcaagtacatg
aactcctaccacatcccgaaggatgtccagaaccggatcaagacctggtttgactacacc
tggaagatccaaggcatgctggatgagcaggagctcctggtccagcttcctgacaagatg
aggctggacatcgccgtggatgtcaactactccattgtcagcaaagtggccctgtttcag
ggctgtgacaggcagatggtgtttgacatgctgacgaggctcaagtccgtcgtgtacctg
cctggagactttgtctgtaaaaagggagagatcggcagggagatgtacatcatcaagcag
ggggaggtccaggtggtgggcggtcccgacctgcagacggtgttcgtcaccatcagagcc
ggctctgtgttcggtgagatcagtctgctggcaggaggtggagggaaccgtcgtacggcc
aacgtgaaggcccatggattcgccaacctcttcattcttgacaagaaagacctggctgag
atcctggttcattaccccgagtcccagaaactcctgcgcaagaaggccaagacgatgctg
acgaaagacgccaagcctgaagtggcggcgggtaaggagcagccggaggtgatcccgccc
agacctgacacaccggaaatgttcaaggcagctctgaaggtgacggagcaggccggcatc
gagggaaccttcgccaagctgaagaaggcctacaagccgtttgaggagggaggagaggag
gaggcacagggtcctacccgcatctctcccatgccgcctccatccccgatgcaccggcgc
tccccggtaccccggaccctggagccggaggacggagacgaggccgtggcggagacggcg
gacagttccgtcatcatcaggatgacgccacggcataaaggagaggagcttctgtccgtg
gaggtgtcaccaagggagggagaggaggccaagaaggaggagcagaaggagaagaagaag
aagaaggagaagaagaagaaatga
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integrated database retrieval system
