Cololabis saira (Pacific saury): 133457344
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Entry
133457344 CDS
T09849
Symbol
ybx1
Name
(RefSeq) Y-box-binding protein 1 isoform X1
KO
K09276
Y-box-binding protein 1
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csai03000
]
133457344 (ybx1)
03019 Messenger RNA biogenesis [BR:
csai03019
]
133457344 (ybx1)
03041 Spliceosome [BR:
csai03041
]
133457344 (ybx1)
Transcription factors [BR:
csai03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, YB-1/DbpB-like
133457344 (ybx1)
Messenger RNA biogenesis [BR:
csai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
133457344 (ybx1)
mRNA cycle factors
Common to processing body (P body) and stress granule
133457344 (ybx1)
Spliceosome [BR:
csai03041
]
Common components
Common spliceosomal components
General mRNP proteins
133457344 (ybx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSD
OB_RNB
S1CSD-TOTE-2
Motif
Other DBs
NCBI-GeneID:
133457344
NCBI-ProteinID:
XP_061592498
LinkDB
All DBs
Position
12:complement(30452038..30456678)
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AA seq
342 aa
AA seq
DB search
MSSEAETQQQQQQQPPQPQPPVAAAAADAESPSSPAAASSAGDKKVIGKSATKVLGTVKW
FNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANV
TGPGGVAVQGSKYAADRNRYRRYPRRRGPPRGGDYPDNYQSDGEGEPGSGGRDKSNKEGG
DNAPEGDSQQQQRRPTYPGRRRYPPYFVRRRFGRRPPYTNAPRGEMAEGGEGDEGQGGPD
QGNKPVRDNYYRGFRPRFRPRGPPRPRPVRDGEEDKENQDGEGGQNQQPRQRRYRRNFNY
RRRRQQTGGNGKPGPETKEAKTGGDPSAEKTSAPEAQQGGAE
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgaggccgagacgcaacaacagcagcagcaacagccgccacagccgcagccg
ccggtcgctgctgctgctgccgacgcggagagcccgtccagcccggcagccgcatcttca
gcgggggataagaaggtcatcggtaagtccgcaacaaaagtcttgggtacagtcaagtgg
ttcaacgtcaggaatggatatggttttatcaataggaatgatacaaaagaagacgttttt
gtacaccagacagccataaagaagaacaacccaagaaaatatcttcgcagtgttggagat
ggagagactgtggagtttgacgtagttgagggggagaagggtgcagaggcagcaaatgtt
accggcccaggaggtgttgcagtccagggaagtaagtacgctgcggacagaaaccgctac
aggcgctatcccagacggaggggccctccccgcggaggagactatccagacaactaccag
agtgatggagagggtgagcctggcagcggcggacgcgacaaaagcaacaaagagggggga
gacaacgcccctgaaggagactcgcagcaacagcagcgcagacccacttaccctggcaga
cggcgctacccgccatactttgtacgtagacgcttcggccgccggcccccgtacaccaac
gcaccacgcggagagatggctgagggaggtgagggtgacgaaggccagggaggtccagac
cagggcaacaaacccgtgagggacaactactacagaggcttccgaccaaggttcagacca
aggggtccaccccgtcccagaccggtgcgggacggcgaggaggacaaggagaatcaggat
ggcgagggtggtcaaaatcagcagccccgccagcggcgctaccgccgtaacttcaactat
cgccgcagacgccaacagactggtggcaatggcaaacctggcccggaaaccaaggaggcc
aaaacaggaggtgacccatctgcagagaaaacgtccgctcccgaggcccagcagggtggg
gctgagtag
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