Cololabis saira (Pacific saury): 133460482
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Entry
133460482 CDS
T09849
Symbol
tent4a
Name
(RefSeq) terminal nucleotidyltransferase 4A
KO
K03514
non-canonical poly(A) RNA polymerase PAPD5/7 [EC:
2.7.7.19
]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
133460482 (tent4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csai03019
]
133460482 (tent4a)
03016 Transfer RNA biogenesis [BR:
csai03016
]
133460482 (tent4a)
Enzymes [BR:
csai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
133460482 (tent4a)
Messenger RNA biogenesis [BR:
csai03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
133460482 (tent4a)
Transfer RNA biogenesis [BR:
csai03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
133460482 (tent4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTPAP-like_central
PAP_assoc
NTP_transf_2
Polbeta
TUTase
PAP_NTPase
DUF7752
Motif
Other DBs
NCBI-GeneID:
133460482
NCBI-ProteinID:
XP_061597037
LinkDB
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Position
15:complement(19824396..19848859)
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AA seq
759 aa
AA seq
DB search
MDPRVAWIQPEQTGPANAVWMHAWETSQGGRTPPNHRRLHHHNQNQNRNRCCGNPAAVDG
LRDVAASRSSCGCSSSGHRGVMHGCMHGGAAPGLRETDSGADSPPSGSLERTNHGALGNL
NRNVDSSVDNSVNLQQQQQPPAACSLQQLCGRRLQQGPVDHTHDHHPGRRKNDNKASTYG
MNYLLSNCTNGNYASSWTPWKTRKYSPGVLGLHEEVMDFYNFMSPRPEEAAMRQEVVNRI
EMIIKELWPTADVQIFGSFSTGLYLPTSDIDLVVFGKWERPPLQELEQALRKHNVAEPFS
IKVLDKATVPIIKLTDQETEVKVDISFNVETGVKAASFIKDYVKRYPVLPYLIFVLKQFL
LQRDLNEVFTGGISSYSLILMVISFLQLHPRIDARNLSGNLGVLLIEFFELYGRNFNYLK
TGIRITNRGAYVAKEEIMKAMPNGYRPSMLCIEDPLLQGNDVGRGSYGAMHVKQVFDYAY
TVLSHAVSPLARSYPNKDCESTLGRIIRLTQEVIDYREWIIKKWGGRDSVRTDNRVSPPK
ELVTEQESCVLTGTVGSEEQQRDSASPHSADSPMSISSPQQHSSASSVSSLSGSDNDSDS
ALPCPPPQQPLPAYPSFPPLGLALHPGLNMGTGKHGLGGHHLLLPSQARVSLPGGLAMHS
IPGRQVCMDTGLSPFFHMPPPAHAHAHAPAPSSPQPLPSPHSSHIHKNGVKFNVKGFHNP
PLVNNAALVNRGHTHTHTQYHRNSWRRRKRDSLPVSLSR
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atggatccgagggtggcgtggatccagcccgaacagacaggacctgccaacgctgtatgg
atgcacgcctgggagacctctcagggggggcggacgccccccaatcaccggcggctgcac
caccacaaccagaaccagaaccggaaccgctgctgcgggaatcccgcggctgtggacggg
ctgagggatgtggcagcgagccggagcagctgcggctgcagcagcagcggccatcgcggc
gtcatgcacggctgcatgcacggcggagccgcgccggggctgcgggagacggactccggg
gcggacagcccgccctccggctcactggagaggactaatcacggtgcacttgggaacttg
aacagaaacgtggacagcagcgttgacaacagtgtaaacctccagcagcagcagcagccc
ccggccgcctgcagcctgcagcagctgtgcggccggcggctgcagcagggacccgtggac
cacacgcacgaccaccacccgggccgcaggaaaaatgacaacaaggcgagcacctacggg
atgaactacttgctctcgaactgcactaatggcaactacgccagcagctggacgccgtgg
aagacgaggaagtacagccccggcgtgctcggacttcacgaagaggtgatggacttctac
aacttcatgtctccacgacctgaggaggcagctatgaggcaggaggtggtgaaccggata
gaaatgatcatcaaggagctgtggcccactgcagatgttcagatttttggcagctttagc
acagggctgtatcttccaacaagtgacattgaccttgtggtttttgggaagtgggagcgt
cccccgttgcaagaacttgaacaagctctgcgtaaacacaatgtggcagaacctttctcc
ataaaagtcctggacaaggctacggtgccaatcatcaagctgaccgaccaggagactgag
gtgaaggtggacatcagttttaacgtagagaccggagtcaaggcggcaagcttcattaaa
gattacgtgaagaggtatcctgtgttgccttacctgatctttgtactgaagcagttcctg
ctgcagagagacttaaatgaagtcttcactgggggcatcagctcttacagcctcatcctc
atggttatcagtttcctgcagctccatcctcgtattgatgccagaaacctcagtgggaac
ttgggcgtgttgctgatagagttctttgagctgtacggccgcaatttcaactatttgaaa
acagggattcgcatcacaaacagaggtgcatatgtagccaaagaggagattatgaaggcc
atgcccaacggatacaggccatccatgctctgcatagaggatccactacttcaaggtaat
gatgtggggaggggctcctacggtgccatgcacgtcaagcaggtgtttgactacgcctac
actgtcctgagtcatgctgtgtcgccacttgcacgatcgtatcccaacaaagactgtgaa
agcacgttggggaggatcatcaggttgacccaggaagtgatcgactacagggaatggatc
attaagaagtggggcggcagggattcagtgcgaacggacaacagagtgtcgcctcctaaa
gagctggtgacggagcaggagtcgtgtgtactaacgggtaccgtgggttcagaagagcag
caaagggactcggcgtcaccccacagcgcagactctcccatgtccatctccagcccccag
cagcactcgtcagcctcatcagtctcctcactgtctggatctgacaacgactctgattcg
gcgttgccatgtcctccccctcaacaacccctgccggcgtacccgtcgttcccgccgctc
ggcctggcgttgcacccgggcctcaacatgggcactgggaagcacggcctggggggacac
cacctgctcctcccttcacaggcccgtgtctcactccccggcggtctagcaatgcactct
atacctggcagacaggtgtgtatggatactgggctctccccgttcttccacatgcccccc
ccagcccatgctcatgctcatgcccccgccccctccagcccccagcctctgcccagcccc
cactccagccacatacacaagaatggtgtaaagttcaacgtgaagggcttccacaaccca
cccctggtcaacaacgctgctctggttaatcgcggacacacacacacgcacacacagtac
catcgtaactcgtggcgacgcagaaagagggacagcctgccagtgagcctcagcagatag
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