Cololabis saira (Pacific saury): 133463621
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Entry
133463621 CDS
T09849
Symbol
cdh5
Name
(RefSeq) cadherin-5
KO
K06533
cadherin 5, type 2, VE-cadherin
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04514
Cell adhesion molecule (CAM) interaction
csai04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
133463621 (cdh5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
133463621 (cdh5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
csai04515
]
133463621 (cdh5)
04090 CD molecules [BR:
csai04090
]
133463621 (cdh5)
Cell adhesion molecules [BR:
csai04515
]
Cadherins
Major cadherins
133463621 (cdh5)
CD molecules [BR:
csai04090
]
Proteins
133463621 (cdh5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_FAT4_N
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
133463621
NCBI-ProteinID:
XP_061601235
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All DBs
Position
17:complement(30692798..30731294)
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AA seq
783 aa
AA seq
DB search
MMARLQPWTGLMPTLALSVFLTVAQNSGLLWAAAEERVSSDIVKKESHPVLVRQKREWIW
NTFTVEEEKPGPFPQKITQLKSTLRESVMKFKIDGEGANTIFFVDANGNLFARKALDREE
KANYSLTAQMFDGNGRLIEDSGDFVIQVNDINDNKPVFPKQYTGSILERASKGTKVIDAV
ATDADDPSTANGLLFYSLIHGGDTFAFEIDSSTGAISCKTNTLDRETKSQYVVVVQAQDM
GGRDTGSTATTSVIINITDINDNLASFTSNAYEVRVPENHLLNEEIITLDLNDKDELKNK
EPIFSIPSFHKDLFNVKRNRNKDAVLTLKQALDYETTKSYTFTVEVKEDLGLLRADNVGK
AITRAQVILRVTDVDEPPVFSRSNYTFTVPEDKEIKTAIGAVTAKDPDAANKAVRYSILE
KDCPIGINPVTGQLSIARKLDRELEATHVFQVRAQEELSGLESYVKVKIIVQDVNDNPPE
LSVDEVFVCENDVTNTVIGVLRATDKDEQAATFTFTLIGQSSNFSIKDYGNGSAGVIVKG
GPFSIDDSQDYGISVRISDGGQPAQSNDAELKIKSCRCDRQRIPTQCKAMAQRMGVSVHA
LIAILLCILTILVIVILFVMRKRYQKDSLANMKNSGEIHEQLVTYDEEGGGEMDTNGYDV
SILTSACHDGSLLRHPDHPHPSLYAMVQKPPQHAQPTACKGDMAAMIEVKKDEADHDRDG
FPYDTLHIYGYEGPESLAGSLSSLESSSTGSNLDYDFLSDWGPRFRALAELYGVDGSDYY
QQY
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgcggctccaaccgtggacaggacttatgcccacgttggccttgtccgtcttc
ctcaccgttgctcaaaactccggacttctttgggcggcagcagaggaacgagtgtcgtcc
gacatcgtgaagaaggaatctcatccggtgctggttagacaaaagagagaatggatctgg
aacacttttactgtagaggaagagaaacccggaccctttcctcagaagataacgcagctc
aagtcgaccttgagagagtcggtaatgaagttcaaaatagatggtgaaggagcaaacaca
atcttctttgtggatgcaaacggaaacctgtttgccagaaaagctctggacagggaggag
aaggccaattacagcctgaccgctcagatgtttgatggaaacgggagactgatagaggac
tctggagactttgtcatccaggtgaacgatatcaacgacaacaagccggttttccccaaa
cagtacaccggatctattctagagagagctagtaagggaactaaagtaatagatgcagta
gcaactgatgcagatgacccctccactgccaatggactgctgttttactccttaatccac
ggtggagatacctttgccttcgaaatcgacagcagcacaggtgccatcagctgcaagaca
aacactctggaccgagaaaccaagagccagtatgtggtggtggttcaagctcaggacatg
ggaggaagagacacgggcagcacagccaccacttctgtcatcatcaacatcaccgacatc
aacgacaatctggcttcttttaccagcaacgcatatgaagtgcgtgtcccagagaaccac
ctgttgaatgaggaaataatcacgctggatttgaacgacaaagatgagcttaagaacaaa
gagcccatcttttccatcccaagtttccacaaagatttatttaatgtcaaacgcaaccgt
aacaaggatgccgtcctcacactcaaacaggctttggactacgaaacaactaaaagctac
actttcactgtggaggtgaaggaagaccttggacttctgcgtgcagacaacgtgggcaaa
gcaatcaccagagcacaggttattctcagggtgacagatgtggacgagccgccagttttc
tccaggtccaactacaccttcaccgtaccggaagacaaggaaataaagaccgcaatagga
gcagtcacagccaaagaccccgacgccgccaacaaggccgtgcggtattccatcttagag
aaggactgtccgatcggtatcaacccagtcacgggtcaactgtcgatcgcgaggaagctg
gacagagagctggaggcaacacacgtgtttcaagttagagcgcaggaggaactgagtggt
ctggagtcctacgttaaggtgaagattattgttcaggacgtcaacgacaatccgcctgaa
ctttctgtggacgaggtgttcgtgtgtgaaaatgatgtcaccaataccgtgataggagtt
ttgagagcgacagataaggacgaacaagcagccaccttcacgttcaccctgatcggtcag
agctccaacttctccatcaaagactacggcaatggctcagctggcgtgatcgtgaaaggg
ggcccgttcagcattgacgactcccaggattacggtatttctgtccgcatcagtgatgga
ggacagcccgcccagagcaacgacgctgaactcaaaatcaagtcgtgccggtgtgatcgg
cagaggatccccacgcagtgtaaagctatggctcagaggatgggggtcagcgttcatgcc
ctcatagccatcctgctttgcatacttacaatactggtcatagtcatcctgtttgtgatg
aggaaacgctaccagaaggactcgctggcaaacatgaagaacagcggagagattcacgag
cagctggtcacctacgatgaggagggcggtggagagatggacactaacggctacgacgtc
tccatcctcacgtccgcctgccacgacggctccctgctccgccacccggaccacccccac
ccgtccctgtacgccatggtgcagaaacctccccagcacgcccagcccaccgcctgcaag
ggggacatggccgccatgatcgaggtgaagaaggacgaggccgaccacgacagggacggg
ttcccgtacgacaccctccacatctacggctacgagggacccgagtctttagccgggagc
ctcagctctctggaaagctcttccaccggttcgaacttggactacgacttcctgagcgac
tggggcccgaggttcagggccctggccgagctgtacggagtcgacgggagcgactattac
cagcagtactga
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