Chryseobacterium salivictor: NBC122_00354
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Entry
NBC122_00354 CDS
T07515
Symbol
capD_1
Name
(GenBank) UDP-glucose 4-epimerase
KO
K15894
UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:
4.2.1.115
5.1.3.-]
Organism
csal
Chryseobacterium salivictor
Pathway
csal00520
Amino sugar and nucleotide sugar metabolism
csal00541
O-Antigen nucleotide sugar biosynthesis
csal01100
Metabolic pathways
csal01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
csal00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
NBC122_00354 (capD_1)
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
NBC122_00354 (capD_1)
Enzymes [BR:
csal01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.115 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-inverting)
NBC122_00354 (capD_1)
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Gene cluster
GFIT
Motif
Pfam:
Polysacc_synt_2
Epimerase
Polysacc_syn_2C
3Beta_HSD
GDP_Man_Dehyd
NAD_binding_10
NAD_binding_4
RmlD_sub_bind
NmrA
Semialdhyde_dh
Sacchrp_dh_NADP
KR
F420_oxidored
adh_short
NAD_Gly3P_dh_N
Sigma54_activ_2
Motif
Other DBs
NCBI-ProteinID:
QBO57203
UniProt:
A0A4P6ZCI8
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All DBs
Position
complement(355936..356967)
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AA seq
343 aa
AA seq
DB search
MKIQNKTLLITGGTGSFGTAVLNRFLKTDHFKEIRIFSRDEKKQDDMRNLYRNDKIKYYI
GDVRDYTSVEPATRGVDYVFHAAALKQVPSCEFFPMQAVKTNVEGTQNVIRAAAFNKVQK
VICLSTDKAAYPINAMGISKAMMEKVAVAESRSLTDTVVCLTRYGNVMASRGSVIPLFLN
QIQKGEEITITDPNMSRFFMSLEDAVDLVLFAFENGNAGDLFVNKAPAGKIGDLAQALME
LSGKEVAMKIIGTRHGEKLYETLCTREEMVKAEDMGDFYRVPADNRDLNYAKYFSEGEQD
VSIIEDYHSHNAEQKGIEGLKSLLSTLPLIRKEIFGENVMQYP
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatccaaaataaaaccctcctcatcaccggtggaaccggctcattcggaaccgct
gtcctcaaccgttttctgaaaactgatcattttaaagaaatccgtattttttcccgcgac
gaaaaaaagcaggacgatatgcgtaacctctacagaaacgataaaataaaatattatatc
ggcgacgttcgcgattataccagtgtagaaccggccactaggggtgtagattatgtcttc
catgccgccgcactgaaacaggttccttcctgtgagttttttccgatgcaggcggtgaag
accaacgtggaaggcacacagaacgtgatccgtgcggctgctttcaataaagtgcagaag
gtcatctgtttaagtaccgataaagccgcttatccgatcaatgctatgggaatttccaaa
gcgatgatggaaaaggtagcggtggccgaatcaagaagtctaaccgataccgtagtatgt
ttaacccgttacggcaacgtaatggcatcaagaggttcagtgattcctttgtttttaaat
caaattcagaaaggagaagaaataaccattaccgatcctaatatgtcaaggtttttcatg
tctttggaagatgctgtagatttggttttatttgcgtttgaaaatggaaatgcaggagat
ctttttgtgaataaagcgcctgcgggcaaaattggtgatttggctcaagcgttaatggaa
ctttccggtaaagaagtagcaatgaaaattattggaacacgacatggtgagaaattatac
gagacactctgcaccagagaagaaatggtgaaggctgaagatatgggagatttctacaga
gtgccggcggataaccgtgatttgaattatgcgaaatatttttctgaaggtgaacaagat
gtttccataatagaagattaccattctcacaacgctgaacaaaagggaatagaaggatta
aaatcattactgtctactttgcctttaatccgaaaagaaattttcggggagaatgtgatg
cagtatccataa
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