Camelina sativa (false flax): 104703539
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Entry
104703539 CDS
T05044
Name
(RefSeq) structural maintenance of chromosomes protein 3-like
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csat03036
]
104703539
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
csat00535
]
104703539
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
104703539
Meiosis-specific proteins
Cohesin complex and associated proteins
104703539
Proteoglycans [BR:
csat00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
104703539
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
ATG14
AAA_23
CENP-F_leu_zip
AAA_29
Motif
Other DBs
NCBI-GeneID:
104703539
NCBI-ProteinID:
XP_010417866
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Position
7:complement(30787281..30798193)
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AA seq
1203 aa
AA seq
DB search
MYIKQVIIEGFKSYKEQVATEDFSDRVNCVVGANGSGKSNFFHAIRFVLSDIFQNLRSED
RHALLHEGAGHQVVSAFVEIVFDNSDNRFPVDKEEIRLRRTVGLKKDDYLLDLKHITKAE
VMNLLESAGFSRSNPYYVVQQGKIASLTLMKDVERLDLLKEIGGTRVYEERRRESLKIMQ
ETGNKRKQIIEVVHYLDERLKELDEEKEELRKYQQLDKQRKSLEYTIYDKELHDAREKLE
QVEVARTKASEESTKMYDRVEKAQDDSKSLDESLKGLTKELQTLYKEKETVEAQQNEAIQ
KKTKLELDVKDFQDRITGNIQSKNDAREQLHMVEREMQDSLKELEAINPLYESQLDKEKQ
TTKRIMELEKKLSILYQKQGRATQFSNKAARDKWLRKEIEDLKRVLDSNMTQEKKLHDEI
LRLNTDLTERDGLIKKHEVEIGELGSHISKSHELFNIKKRERDEEQRIRKEKWGEESQLS
SEIEKLKMELERAKKNLEHATPGDVRRGLHTIRRYVEEYRINGFFGPLVELVDCDEKFFT
AVEVTAGNSLFHVVVENDDISTKLIRHLNSIKGGRLTFLPLNRVKAPHVNFPQDSAAIPL
LKKLKYDSKFGPALAQVFGRTVVCKDLNVATRVAKSNGLDCITMEGDQVSKKGGMTGGFY
DHRRSKLRFMNIIIQNTKSINAKVTELEDVKRQLDVIDQHITQFVTEQQRLEADWTHSKL
QVEQLKQEIANVNKQKHAIYKALENKEKSLGDIRTQIDQLRSSMAMKEAEMGTELVDHLT
PEEREQLSRLNPEIKDLKEKNIAYTTDRIERETRKAELEANLATNLERRRNELQATIASI
DDDSLPSSAGLNTQELDDAKNLVNEAAKELKSLCDSIDEKTKQVKKIKDEKAKLKILEDD
CKGTLQDVDKKLEELFSLRNTLLAKQDEYTKKIRGLGPLSSDAFDTYKRKNIKELQKMLH
RCSEQLQQFSHVNKKALDQYVNFTEQREELQNRQAELDAGDEKIKELITVLDQRKDESIE
RTFKGVARHFKEVFSELVQGGYGQLLIKKFKDRDHDDEDDDDDGSRKTDAEGRLEKYFGV
KVKVSFTGQGETQAMKQLSGGQKTVVALALIFAIQRCDPAPFYLFDEIDAALDPQYRTAV
GNLIRRLADKYGTQFITTTFRPELVRVADKIYGVFHKNRVSIVNVISKDQALDFIEKDQS
HDT
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgtatatcaagcaggttataatcgaaggatttaagagttacaaagagcaagttgctact
gaggatttcagcgacagagttaattgtgttgttggggcgaatgggtctgggaaaagcaat
ttcttccatgcaattcgttttgtattgagtgacatcttccagaatctgcggagtgaagat
aggcatgcattactccacgaaggtgctggtcatcaagttgtttctgcgtttgtggagatt
gtgtttgataattctgacaaccggttcccggttgataaggaagaaattcgcttgcgccga
acagttggtctgaagaaggatgactatttattggatttgaaacacataacaaaagctgaa
gttatgaatttattggagagtgctgggttttctcgttctaatccgtactatgttgttcaa
caaggaaagatagcctcgttaacactgatgaaagacgtggaacggctggatctgctaaaa
gagataggtggtacccgtgtttatgaggagaggcgtcgtgagagtttaaaaattatgcag
gagacagggaataaacggaagcagattatcgaagttgtccactacttggatgaaagacta
aaggaattggacgaagagaaagaagaactcagaaaatatcaacaacttgacaagcagagg
aaatcactggaatacaccatttacgacaaagagcttcacgatgctcgggagaaactggaa
caggtagaagttgcacgaactaaggcatctgaagagtctactaaaatgtatgatagagtt
gagaaggctcaggacgactccaagtccttagatgagtcgctaaaagggctgacgaaggag
cttcagacattatacaaggagaaagaaactgttgaagctcaacaaaatgaagctatacag
aagaagacaaagctggagcttgatgttaaggactttcaggatcggattactggaaatatc
cagtctaagaatgatgcacgtgagcagcttcatatggtggaaagagaaatgcaggattct
ttaaaagaactggaggcaattaatcctttatatgaaagtcaacttgacaaggaaaagcag
acaacaaaaagaatcatggagctggaaaaaaaacttagcattctttaccagaaacagggc
cgtgcaactcaattttcaaacaaggctgcccgagacaaatggctcaggaaggagattgaa
gatcttaagcgtgttctagactcaaatatgactcaagagaaaaaacttcatgatgaaatt
cttcgcctcaatactgatttgacagagcgtgatggactcatcaagaaacatgaagttgaa
attggtgaactgggatctcacatttccaagtcccatgaactattcaatattaaaaaaagg
gagagagatgaagaacagagaataagaaaggaaaaatggggagaagaaagtcaactatct
tctgaaattgagaagttgaaaatggaacttgaacgggcaaagaaaaacctcgagcatgca
actccaggagatgttaggcgagggctgcacactattcgacggtatgtcgaagagtatagg
atcaatggattttttggtccacttgttgagttggttgattgcgatgaaaagtttttcact
gcagttgaagtcactgctggaaacagcctgtttcacgtggtagttgagaatgatgatatt
tcaaccaagttaatcagacacctgaattctataaagggtggtcgactgaccttcttacct
ctgaatcgggtaaaggcgcctcatgtaaactttccacaagattctgctgcaataccactg
ctgaaaaagttaaagtacgactctaagtttggaccagcattggctcaggtttttggtaga
acagtagtatgtaaagatctgaatgtagcaacaagagttgctaagagtaatggcctcgat
tgcataactatggaaggtgaccaggtgagcaaaaagggtggtatgacaggtggattctat
gaccacaggcggtcaaaattaagattcatgaatattataatacaaaatacaaagtctata
aatgcgaaggtgacagaattggaggatgttaaaaggcagcttgatgtgatagatcagcat
attacacagtttgttactgagcagcagagacttgaagcagattggacgcacagcaaatta
caggtggagcaacttaagcaagagatagctaacgtaaataagcagaaacatgctatatat
aaagctcttgaaaataaggagaaatcactaggtgatattagaacacaaattgatcagctt
agatccagcatggctatgaaggaagctgaaatgggaacagaacttgtggatcacctaaca
ccagaagaaagggagcagttgtcacgattaaaccccgaaattaaggatcttaaggaaaag
aatattgcatacacgacggatcgcattgagagggagacaagaaaagcagagttggaggct
aatttggctaccaacttagagaggagaagaaatgagttacaggctactatagcttccatc
gacgatgatagtttgcctagttcagctggcttaaatacacaagaacttgatgatgcaaag
aatttggttaatgaggccgcaaaagagcttaaaagtctttgtgacagcatcgacgagaag
acgaagcaagtcaagaaaattaaagatgagaaagcaaagctaaagatattggaagatgac
tgtaaggggacactgcaagatgtagataaaaagttagaggaactatttagccttcgcaac
acactccttgctaagcaagatgagtatacaaagaagattaggggattgggtccattgtcg
tctgacgcttttgacacgtataaacgaaaaaatatcaaggagctgcagaagatgctacac
cggtgcagtgaacagctacaacaattcagccatgtaaacaagaaggcgcttgatcaatat
gtaaatttcacagaacagagagaagaactccagaatcggcaagcagagcttgatgcagga
gatgagaaaattaaagaactgataacagttctggatcagcggaaagacgaatcgatagaa
cgtactttcaaaggggttgcacgtcacttcaaggaggtattctctgagcttgtgcaaggt
ggatatggtcagcttctcataaagaaatttaaggatcgtgatcatgacgatgaagatgat
gacgatgatggaagtcgtaaaactgatgcagagggaaggcttgagaagtactttggcgta
aaagtgaaggtgtcatttactggtcaaggagagacacaagcaatgaaacaattgtcagga
ggccaaaaaaccgttgttgctcttgcactaatctttgccatccagcgatgcgatcctgca
ccattctatctttttgatgagattgatgcggcacttgatcctcagtatcgaaccgctgtg
ggcaacttgattcgtcgtctagctgataaatatggcactcagttcataaccacgactttc
cgtcctgagcttgtgagagttgcggacaagatatatggagtatttcataagaacagagtg
agtatcgtgaatgttatttcaaaggatcaggcattggacttcatcgagaaagatcaatcc
cacgacacctga
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integrated database retrieval system