Camelina sativa (false flax): 104705545
Help
Entry
104705545 CDS
T05044
Name
(RefSeq) transcription initiation factor TFIID subunit 1b-like
KO
K03125
transcription initiation factor TFIID subunit 1 [EC:
2.3.1.48
2.7.11.1
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104705545
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
csat01001
]
104705545
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csat03021
]
104705545
03036 Chromosome and associated proteins [BR:
csat03036
]
104705545
Enzymes [BR:
csat01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
104705545
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
104705545
Protein kinases [BR:
csat01001
]
Serine/threonine kinases: Other
TAF1 family
104705545
Transcription machinery [BR:
csat03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
104705545
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
104705545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3591
ubiquitin
Ubiquitin_5
DUF1254
Spo12
Motif
Other DBs
NCBI-GeneID:
104705545
NCBI-ProteinID:
XP_010419866
UniProt:
A0ABM0T2B4
LinkDB
All DBs
Position
1:complement(8699431..8705392)
Genome browser
AA seq
1054 aa
AA seq
DB search
MSDSNDDETSSDYESNGEEYDGPEVQVVTEEDHLLPKGEYFSAAFAFGSLNSRASVFDDE
DYDEIEEQEEEHAPVDKSFVSEESEPVVLNEEKAVEYEKEACILGNEDQMDTGDVQEEEV
DDISEGTLDEKSVTPLPTLYLEDGMVVLQFSEIFSIHEPRQKRHKRKLRCITYRAFFHID
KYLSMDISELVEDDEEVLLKSHGRIDTHVKEADLIQLDVPFPIREGSQLVKAGTVRGTTP
ESREFTKLGSDSCIMDELLKQDSKNDNSSLCQSQLEMEIFPLDQQEWEHRILWENSPEFS
GNSGESFKSGIESESMLVQVTNSETEQEESVNVMNSGGKAQAGSDTVMPFLVNPLESFGS
RGSLSTYEFTNKRRHHPQLLRLESHWVEDHRSENDNTGGENLKWLNSDVLGGLIGFALQD
RDMGDEAWLDRIIWESDTDLSRSKLIFDLQDEQMVFEVPDNEERKYLQLHSRSMIVSQSS
KSKDETSQESCESNSGWQFNISNDHFYTNGKSSQLQGNAKKYGEHSLRVFHSSPAIKLQT
MKIKLSNIEKANFHRPKALWYPHDNALAIKQQGKLPTQGSMKIVVKSLGDFKDTEAVKMF
YMGKELKDEKSLAEQNVQPNSLVHILRTKVHLWPWKLPGENKSLRPPGAFKKKSDLSTQD
GHVFLMEYCEERPLMLSNVGMGANLCTYYQKSSPEDQHGNLLHNQRDTLGSVMILEPGDK
SPFLGKIHSGCSQSSVETNMYKAPVFPHRLQSTDYLLVRSAKGKLSIRRIDKIVAVGQQE
PRMEIMSPASKKLQTYLVNRMMVYVYREFKLRNRIAASELSFLFSSLSDAVIRKNMKVCA
DLERDKNGKPCWSKKCDFDKILPELKNLVAPEDVCSYESMLAGLYRLKQLGITRFTLPAS
ISTALAQLPDEVTTLAAASRVERELQTTPWNLSRNFVICTTQGRANIERLEITGVGDPSG
RGLGFSYVRSASKAPAAAGHMKKKAAARCGVLSGTEVDLRRLSMEEAQEVLLKFNIPDEI
IVKQSRRHRIAMIRKLSSEQVASGDPTKVSGDLG
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattccaacgacgacgagacttcctcagattatgagagcaatggcgaagagtat
gatgggcctgaagttcaagtagttactgaggaagatcatctactgccaaaaggggagtat
ttttcggctgcatttgctttcggtagtttaaattccagagcttctgtgtttgacgacgaa
gattatgatgagatagaagaacaagaggaggaacacgcgccagttgataaatcttttgtt
tctgaagagagtgaaccagttgtcttgaacgaggaaaaagccgtggagtatgagaaagag
gcttgcatcttgggaaatgaggatcagatggacacaggagatgtccaggaggaggaggtg
gatgacatatcagaaggtactttggatgagaaaagcgtcaccccactgcctacattgtat
ctggaagatggtatggtcgtcttacaattctctgagatattttctattcacgagccgcgg
cagaaacgacacaagagaaaactcagatgtatcacttatagagccttctttcatatagac
aagtacctatctatggatatttctgagcttgtcgaagacgatgaggaagtacttctgaag
agccatggcaggattgacactcatgtgaaagaagctgatctaattcagctggatgttccc
tttccaatcagagagggttcacagctggtaaaagctggtacagtcaggggtactacacca
gaatcaagagaatttaccaagctaggaagcgattcatgtatcatggatgaactgttgaag
caggactcaaaaaacgataattcatctctttgccagtcccagttagaaatggaaattttc
ccccttgaccagcaagaatgggaacatcgtatactctgggaaaattctcctgaatttagt
ggtaattctggtgagagcttcaaatctggaattgagtcagaaagtatgctggttcaggta
acaaattcagagactgaacaagaagaaagcgtaaatgtgatgaactctggagggaaagct
caagctggcagtgatacggtcatgccttttcttgtaaatcccttggagtcttttggctca
agaggttccctgtctacatatgagttcactaataaacgtagacatcatccacaacttctg
aggttagaatcccactgggttgaggatcatcgaagtgaaaatgacaatactggaggggaa
aatctaaagtggcttaatagtgacgttcttgggggcttgattggatttgcattgcaagat
agggatatgggggatgaggcatggttagatcgcataatatgggaatcagatacagattta
agccggtctaaactaatatttgatcttcaagatgagcaaatggtctttgaagttccggat
aatgaggaaagaaaatatcttcaacttcattcccgatctatgattgtatcccaatcttca
aaatccaaggatgaaacctctcaagaatcctgtgaatcaaattctgggtggcaattcaat
atttcaaatgaccatttctatacaaatgggaaaagctctcagctgcaaggaaatgcgaag
aaatatggcgaacacagtttgagagtttttcattcatcaccagcgattaaattgcagacg
atgaagattaaactgagcaatatagagaaagcaaattttcaccggcccaaagctctgtgg
tatccacatgacaatgcactagccatcaagcagcaaggaaaattacccacccaaggatcc
atgaaaatagtagttaagagtctgggggattttaaggacacagaagcagtgaagatgttt
tatatgggaaaggaacttaaggatgaaaagtctcttgctgaacaaaatgttcaaccaaat
tccttggtccatattttacgtactaaggttcatctgtggccatggaagctacctggcgaa
aataaatccttaagacctcctggggcattcaagaagaaatctgacctatctactcaagat
ggccatgttttcttgatggagtattgtgaagagaggccattgatgctcagcaatgtagga
atgggtgcaaatttgtgcacgtattatcagaagtcatccccagaggatcaacatgggaac
ttgctacacaaccaaagagacaccttaggaagtgtgatgattctagaacctggggacaaa
tcccctttccttgggaaaatacacagtggttgcagtcagtcatctgttgaaacaaacatg
tacaaagcacctgtttttcctcataggctgcaatcaacagattatttgttggtccggtct
gctaaaggaaagctctctataaggcgtattgacaagatagtcgctgttggacaacaggaa
ccgcgaatggaaataatgtctcctgcatcaaagaaactacagacttatttggtgaacaga
atgatggtctatgtgtatagagagtttaagcttcgcaaccgtattgctgcatcggagctg
tctttcttattttcaagcttatcggacgcagtcatcaggaagaacatgaaagtttgtgca
gacttggagagggataaaaatgggaagccttgctggtccaagaaatgtgattttgacaag
attctacctgagttgaaaaatctggtggccccagaggatgtgtgttcctatgagagtatg
ctagctgggctgtaccggctcaaacaattagggatcacccggtttacattgcctgctagc
atatcaactgcactggctcagctcccagatgaagttactactcttgctgctgcatcacgt
gttgagagggagttgcagactactccgtggaatctgagccgtaattttgttatttgtaca
actcagggcagagcaaatatagagcgattggaaattactggagttggcgatccctctgga
cggggtctaggattcagctacgtccgatcagcatcaaaagcaccagctgcagccggacat
atgaagaaaaaggcagcagcccgttgcggagtcctctctggcacagaagttgatcttcgc
agattaagcatggaagaagctcaagaggttcttctcaagttcaatattcctgatgagatt
attgtcaagcaatctcgacggcatcgtattgctatgatacgcaagctatcaagtgagcag
gttgcatctggtgacccgacaaaagtgtcaggagatttgggatag
DBGET
integrated database retrieval system
