Camelina sativa (false flax): 104705731
Help
Entry
104705731 CDS
T05044
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 2, mitochondrial-like
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104705731
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104705731
03016 Transfer RNA biogenesis [BR:
csat03016
]
104705731
Enzymes [BR:
csat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
104705731
Messenger RNA biogenesis [BR:
csat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
104705731
Transfer RNA biogenesis [BR:
csat03016
]
Prokaryotic type
tRNA degradation factors
104705731
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
Motif
Other DBs
NCBI-GeneID:
104705731
NCBI-ProteinID:
XP_010420100
LinkDB
All DBs
Position
8:complement(2365689..2372127)
Genome browser
AA seq
996 aa
AA seq
DB search
MSSIVNRARSSSLPNLLAWRALGFRTICSGRLGFAPSDPDSPASAGTKILESFKEEFEVG
SRVVSFETGKIARFANGSVVLGMDQTKVLSTVTCAKTDSPRDFLPLTVDYQEKQYAQGLI
PNTYMRREGAPKERELLCGRLIDRPIRPLFPSGFYHEVQIMASVLSSDGKQDPDILAANA
SSAALMLSDVPWRGPIGVIRIGRIYGQFVVNPTMDELSSSDLNLIYACTREKTMMIDVQA
REISEKDLAAALRLAHPEAVKYLDPQIRLAEKAGKQKKEYKLSMLSEKTLEKVTDLAATR
IESVFTDPSYGKFERGEALDNIGKDVRRVFEEEGDQESLSILPKAVDTVRKKVVRSRMIS
DGFRVDGRNLDEVRPIYCESSYLPALHGSALFSRGDTQVLCTVTLGAPGDAQSLDSLVGP
PKKRFMLHYSFPPYCTNEVGKRGGLNRREVGHGTLAEKALLAVLPPEEAFPYTVRINSEV
MSSDGSTSMASVCGGSMALMDAGIPLRAHVAGVSVGLVTDVDPSSGEIKDYRIVTDILGL
EDHLGDMDFKIAGTRNGVTAIQLDIKPAGIPLDIVCESLENAREARLQILDHMERNINSP
RSQDGASSPRLATLKYSNDSLRSLIGPMGVLKRKIEEETGARLSINDGTLTIVAKNQAVM
EKAQEKVDLIIGREIVAGEVYKGTVVTIKEYGAFVEFSGGQQGLLHMSELSHEPVSKVSD
VLSIGNYITVKCIDTDVRGNIKLSLKALSPKPKRKPESDPEKYPVMKESSTVSIETSSVG
ETVASMPSIVTPPQKSKLAVPAVVIRTAVECDEAEKSSPVDKNNKPKRAATPKPDRKPKS
TASKLTASQKEKEALELCAPEEIIAECGETLKQDRKLKPASPKNNSTASIVSDSNLVSSS
KAKKSTRKEDQYENKAEESATVSTRELKIGTEMMAKVQQVRPLGLVLDLGGGIRGMYKFE
DNEETEFEEGDTLQVKCTSFTTKGIPEMVLVDEEED
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgattgtgaatcgagctaggtcatcttctcttccaaatcttctcgcatggcgt
gctttaggttttcgtaccatctgctctggccgccttggtttcgctccctctgatccggac
tcgccggcctccgcaggaaccaaaatattggaatcttttaaggaggagttcgaagtcgga
tcccgcgttgtctcgttcgagactggcaaaatcgctcgcttcgctaatggctccgttgtt
ctcggcatggaccagaccaaagttctctctaccgttacctgtgctaagaccgactcgccc
cgagatttcttgcctctcactgttgactatcaagagaagcaatacgcccaaggtttgatt
ccaaatacatatatgcgaagagagggtgcaccaaaggagcgggagctgttatgtggccgg
ctcattgatagaccaatcagacccttgtttccttcagggttttaccatgaagttcagata
atggctagtgttctatcgtcggatgggaagcaggatccagatatactagcagctaatgca
tcatcagctgccttaatgctatcggatgttccatggagaggacccattggagtcatccga
ataggaaggatatatgggcagtttgttgtcaatccaacaatggatgagcttagctcaagt
gatcttaatttgatatacgcttgcacaagagagaagactatgatgattgatgttcaagcc
cgtgaaatctcagagaaagatttagcagctgccctgaggctagctcatccagaggctgtt
aagtaccttgatccccaaataagattggcagaaaaagctgggaaacaaaagaaggagtac
aaattgtccatgctttctgagaaaactttagaaaaagtgactgacttggctgcaacgcgt
attgaatccgtctttactgacccttcttatggaaagtttgaacgtggagaggctctagat
aacattggaaaagatgtaagaagagtatttgaagaagaaggtgatcaagaaagcttgagc
attcttccaaaggctgttgatacagtgagaaagaaggtagtccgttcaaggatgatatca
gatggatttcgagttgacgggagaaatcttgatgaagttaggcccatctattgcgaatcc
agttatttacctgcgctgcatggatcagcacttttctcacgtggagatacgcaggtgctc
tgtactgtcacacttggagccccgggagatgcacaaagcttggattcccttgttggcccc
ccgaaaaagagatttatgcttcactacagctttcctccatattgtacaaatgaagtcgga
aaacgaggtggccttaacaggcgtgaagttggtcatggaacgcttgctgagaaagcattg
cttgctgtcttgccccctgaagaggcttttccttatacagttcgtataaattcagaagta
atgtcctcagatggatccacgtcaatggcaagcgtttgcggaggtagtatggcattaatg
gatgccggaatccctctgcgagctcatgttgcgggtgtctccgttggtcttgtcaccgat
gtagatccatcaagtggtgaaataaaggactaccgtatagtaactgatattctgggtttg
gaagatcatctgggagatatggatttcaagattgctggcacacgaaatggtgtgacagcg
attcagctggatataaagccagctggaataccgttggacatagtttgtgaatccttagaa
aatgcacgtgaagcccgtcttcagattcttgaccacatggagagaaacataaattcccca
cgaagccaggatggggcttcttctcctcggctagcaacgttgaagtacagcaatgactca
cttcgtagcttgatcggacctatgggtgtactcaagagaaagattgaagaggaaacaggt
gcaagattgtctattaacgatggaacattaactattgttgccaagaatcaggctgtgatg
gaaaaggctcaagaaaaggttgacctcatcattggtcgtgaaatagttgctggtgaggtg
tacaaaggcacagtggtaactataaaagagtacggtgcatttgttgagttcagtggtggt
cagcaaggtctactacatatgtctgagctatctcatgaaccagtctccaaggtttcagat
gtattatctattggcaactacatcacggtgaagtgcatcgataccgatgtccgcggtaac
attaaattatctctcaaagcattgtcgcccaaacccaaacgcaaaccagaatctgatcct
gagaaatacccggtgatgaaagagtcgtcaacagtctccatagaaacgtctagtgttgga
gagacagttgcaagcatgcccagtatcgttacgccacctcagaaatctaagttagcagtt
cctgcagttgtcatccgtactgctgtagagtgtgatgaggcagagaaatcttcccctgtg
gacaagaacaacaaacctaaacgcgccgcaacaccgaaaccagaccggaaacccaaatcc
actgcctctaaactgactgcgtcacaaaaggaaaaagaggcacttgaactttgtgctcca
gaagaaattatagctgaatgtggtgagactctgaagcaagacaggaaactaaaacccgct
tctccgaaaaacaatagcacagcttcaatagtttctgattctaatctagtatcatcttca
aaagctaagaaatcaactaggaaggaggatcaatatgagaacaaggcggaagagagtgca
acggttagtacccgagaactgaaaataggaacagagatgatggccaaggtgcaacaggtt
cgaccccttggattggttcttgatttaggtggtggaatccgcggtatgtacaaattcgag
gataatgaagaaacagagtttgaagagggagacacattgcaagtaaaatgtacaagtttt
acaacaaaaggaatccctgagatggttttggttgatgaagaggaagactag
DBGET
integrated database retrieval system
