Camelina sativa (false flax): 104708428
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Entry
104708428 CDS
T05044
Name
(RefSeq) transportin-1-like
KO
K18752
transportin-1
Organism
csat
Camelina sativa (false flax)
Pathway
csat03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104708428
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104708428
03009 Ribosome biogenesis [BR:
csat03009
]
104708428
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
104708428
Ribosome biogenesis [BR:
csat03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
104708428
Pre-60S particles
104708428
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
IBN_N
HEAT_GCN1
TPR_IPO5
TOR1L1_N
HEAT_EF3_N
Ltn1_1st
TPR_IMB1
TPR_DNAAF5
Usg
HEAT_DAAF5
Motif
Other DBs
NCBI-GeneID:
104708428
NCBI-ProteinID:
XP_019086745
UniProt:
A0ABM1QJ07
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All DBs
Position
1:complement(15404425..15419245)
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AA seq
940 aa
AA seq
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MAATAVVWQPRDDGLAEICALLEQQISPSSVVDKSQIWQQLQHFSQFPDFNNYLVFILVR
AEGKSVEVRQAAGLLLKNNLRGAYPSMVQENQKYIKSELLPCLGAADRNIRATVGTIISV
IVNIEGVSGWSELLPALVTCLDSNDLNHMDGAMDALSKICEDIPHVLDSEVPGLAERPIN
IFLPRLFQFFQSPHASLRKLALGSVNQYIIIMPAALFHSMDKYLQGLFVLANDPVAEVRK
LVCAAFVHLTEVLPSSIEPHLRNLMEYMLQVNKDPDEEVSLEACEFWSAYCDAQLPPENL
KEFLPRLIPVLLENMAYADDDESLLDAEEDESQPDRDQDLKPRFHTSRLHGSEDFDDDDD
DDDSFNVWNLRKCSAAAIDVLSNVFGDEILPALMPLIQTKLSASGDEAWKDREAAVLALG
AIAEXLPVKVLRNLFGSLRSLKKNPGVGWSARRPKIPESATNSRRFDIDQHPNALFLQIV
AFLLPLLDDKFPLIRSISCWTLSRFGKYIIQESGNPKGYEQFEKVLLVLAGLLRKLLDNN
KRVEKAACSAFTTLVKDAGVDLVKYLEVMLEHIICAFGTSKRENIRIVYDAIRTLPMVVR
EELITKPGYLEIMISSLVAKWEQLSKSDKDLYPMSECFLSISQALGARFIPFAQAVFKRC
IRIMEKQRLTKVGLAAAGVQYDKGIIVWSLDFLYDLAEGLGSGIGSLVEQSNLRVMLLGY
CLDNASDVREKAFALMGVLARVYPVYIQPNLREFLEITSKQLRANVIRENVNVATNACWA
IGELAVKVCHEVSPFVTSVVSSLSLILQHGEGVNKALAEISAITLGRLAWIRPDLVAPRM
EHFVEPWCKKLSKLYDGTKKEDAFRGLCAAVKLNPSGVANSGHFICEAIASWHEIKSEDL
QKEVSQVLNVFKNMLGRSSWEKYISSLDPLVKERLARYNV
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgacggcggtggtctggcaaccccgagacgacggtctcgccgagatctgcgct
cttctcgaacaacagatttctccttcctccgtcgtcgacaagtctcagatttggcagcag
cttcaacacttctctcagttccctgatttcaacaactatctcgtcttcatcctcgttcgc
gctgagggcaagtccgtagaggttcgccaagctgctggattacttctgaaaaataatttg
aggggtgcttatccatccatggttcaagaaaaccaaaaatacatcaagtcagagttgttg
ccttgtctgggagcagcggacaggaatatacgggctacagttggaactatcatcagtgtt
attgtgaatatcgaaggagtttctggatggtctgagcttttgccagctcttgttacttgc
ttagacagtaatgatctaaatcacatggatggtgcgatggatgcattgtcaaagatttgt
gaggatatcccgcatgtcttggattcagaagtgcctggcttagcagagcgccctatcaac
atattcttgcctaggctatttcagttttttcagtcaccccatgcttcactgaggaagctt
gccctgggttctgtgaaccaatatatcataataatgcctgctgctttgttccattcaatg
gataagtaccttcagggtttgtttgtcctcgccaatgatcctgtagcagaagtcagaaaa
ttggtctgcgcagcatttgtgcacctcacggaagtcctcccctcatctatagagccgcat
ctcaggaatctcatggagtacatgttacaagttaacaaagaccctgatgaagaagtgtct
ctcgaagcatgtgaattttggtctgcatactgtgacgctcagctgccgccagagaacttg
aaagagtttctgccacgcctaattccagtgttgcttgaaaacatggcttatgcagatgac
gacgagtcccttttggatgcagaggaagatgagtctcaaccagacagagatcaggatttg
aaacctcgttttcatacatcaagacttcatggttcagaggattttgatgatgatgatgat
gatgatgactcgtttaacgtgtggaatttaagaaagtgtagtgcagcagctattgacgtg
ctctccaatgtatttggagatgaaatccttccagcactcatgcccctaattcagacaaaa
ttgtcagcttctggtgatgaggcctggaaagatagggaagctgctgttttggctctcggg
gctattgctgaanagctacctgtcaaggtcttaagaaatctttttggtagtttaagatca
ctgaaaaagaatcctggtgttggttggtcagctagaaggccaaaaattcctgaaagtgct
actaatagtaggagatttgatatagatcaacatcctaacgccttatttctgcagattgta
gcatttcttcttcctcttttagatgataaattcccgctcatacgaagcatatcttgctgg
acgctttctcgatttggcaagtatattatccaggaaagtggcaatccgaagggttatgaa
cagtttgagaaagtgcttttggttcttgccggtcttcttcgcaaactcttggataataac
aagcgggtcgagaaggccgcctgttcagcttttacaactcttgtaaaggatgctggtgta
gacttggtgaaatacctggaggtaatgctagaacatattatatgcgcttttggaacgtct
aagagggagaacatcagaattgtttatgatgcaattagaacactgccaatggttgttcga
gaagagctgataactaagcctggttatcttgagattatgatttcctcactggttgcaaaa
tgggaacaactttcaaagtcagataaagatctatacccaatgtcagaatgctttttatca
atttctcaggctttaggtgccagattcattccatttgcccaggctgttttcaagagatgc
atacgaatcatggaaaagcaaagactaactaaggttggtcttgctgctgctggggttcag
tatgataaggggattatcgtttggtctcttgattttctttatgaccttgctgaagggctt
gggagtgggatagggtcactggttgaacaaagtaatttaagagttatgcttcttggctat
tgcttggataatgcttctgatgtcagagaaaaagcttttgcccttatgggagttcttgca
agagtatacccggtctatatacaacccaacctacgtgagttcctcgaaatcacaagcaag
caactgagagcaaacgttattagagaaaatgttaatgtcgcgactaatgcttgttgggcc
attggagaattagctgtcaaggtttgtcacgaagtctcaccattcgtgaccagtgttgtc
tcttccctaagcttgattcttcaacatggagagggtgtcaataaggcactagctgagatc
agtgcaattacacttgggagactagcatggattcgtccagacctagtcgcaccgcgcatg
gagcacttcgtggaaccatggtgcaagaaattgtcaaagttatatgatggcactaagaaa
gaagatgcatttagagggttatgtgctgcggttaaactgaatccatcaggagttgctaac
tcaggtcatttcatatgtgaagccattgcgagttggcacgaaataaaaagtgaggactta
cagaaagaagtttcccaagtgttgaacgtctttaagaatatgctgggaagaagttcatgg
gagaaatacatctcttctctggatcctcttgtaaaggaaaggcttgcgagatataatgtg
taa
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