KEGG   Camelina sativa (false flax): 104708497
Entry
104708497         CDS       T05044                                 
Name
(RefSeq) splicing factor SF3a60 homolog
  KO
K12827  splicing factor 3A subunit 3
Organism
csat  Camelina sativa (false flax)
Pathway
csat03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104708497
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:csat03041]
    104708497
Spliceosome [BR:csat03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    104708497
 Complex B
    104708497
 Complex C
   U2 SnRNP specific factors
    104708497
SSDB
Motif
Pfam: SF3a60_Prp9_C SDE2_2C SF3A3 SF3a60_bindingd
Other DBs
NCBI-GeneID: 104708497
NCBI-ProteinID: XP_010423382
UniProt: A0ABM0TAP0
LinkDB
Position
8:25071820..25075696
AA seq 505 aa
MSSTLLEQTRSSHEEVERLERLVVQDLQTEPPSSKDRLVQGHRVRHMIESIMLTTNKLVE
TYEDKDGAREDEIAALGGGQAAFSAFYDRLKEIREYHKRHLSGRLVDANEDYEALLKEEP
VIAFSGEEGVGRYLDLHDMYNQYINSKFGERVEYSAYLDVFSRPEKIPHKLKLSRQYRKY
MEALLEYLVDFFQRTEPLQDLDRILSRVETDFEEQYANGKVEGWENHSQENELIPSQHTV
IDLDYYTTVEELVDVGPEKLKEALGALGLKVGGTPQQRAERLFLTKHTPLEKLDKKHFAK
PLHNGKQNGDVKSTQQSENAKEIALTEVKVKKLCQLLDETIERTKQNIVKKQSLTYEEME
GEREGEEANAESESDDEDGDIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCDICGDYSY
WGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELWKRIQERQGENKWRPELE
EEYEDREGNIYNKKTYSDLQRQGLI
NT seq 1518 nt   +upstreamnt  +downstreamnt
atgtcatcgactctcctcgagcaaactcgctccagtcatgaagaggttgaaaggttggag
cgattagttgtgcaagatctacagactgagccaccgtcaagcaaggacagattggtccag
ggacatcgtgttcgtcacatgattgaatctatcatgctcaccacgaacaaacttgttgaa
acctatgaagataaggatggggcaagggaagatgaaatagcagcgcttggtggtggccag
gctgcgtttagtgcattttacgatcgtttgaaagagatacgtgaatatcataaaaggcat
ctttctggacgtcttgttgatgctaatgaagattatgaagcactcctgaaggaggaacca
gttattgcgttcagtggagaggagggtgttggtcggtacttggacttacatgatatgtat
aaccagtacatcaactctaaatttggggaaagggttgaatattctgcttaccttgatgtt
ttttctagaccagagaaaataccgcataaactaaagctatcgaggcaatacaggaagtat
atggaagcactgctagagtacttggtcgactttttccagcgaaccgagccattgcaagat
cttgaccggatactttctagggttgaaactgatttcgaagagcaatatgcgaatgggaaa
gtagaaggctgggagaaccatagccaggaaaatgagcttattccatctcagcatactgtc
atagatctggattactacactacagtcgaggaactggtagatgtgggtcctgaaaagcta
aaggaggcattgggggcattaggactgaaggttggtggtacaccgcagcagcgtgccgag
agacttttcctgacaaagcatacgcctttggaaaagctggataagaaacattttgccaaa
cctctacacaatgggaaacaaaacggagatgtcaaatcaacgcagcagtcagaaaatgct
aaagagattgcactaacagaggtcaaagtgaagaaactctgccaattactcgatgagaca
atcgaaaggacaaaacaaaacattgtaaagaaacagtccttgacatatgaagaaatggag
ggagaacgagaaggggaggaagctaatgccgagtcagaaagtgatgacgaggacggtgat
atttacaatccgctgaagctgccaatgggttgggatgggaagcctataccatactggctc
tacaaacttcatggcctgggccaggagtttaaatgcgacatatgtggggactatagttac
tggggaagaagggcttttgagagacattttaaagaatggagacaccagcacggaatgcgt
tgcctaggaatccctaacacaaagaacttcaatgagatcacttcaattgaggaagcgaaa
gaattgtggaagaggatacaggagaggcaaggagagaacaaatggaggccagaactcgaa
gaggagtatgaagatcgtgaaggtaacatttacaacaagaagacttactctgatctccag
cgccaaggtctcatctga

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