KEGG T05044: 104709287

Camelina sativa (false flax): 104709287

Entry

104709287         CDS       T05044

Name

(RefSeq) putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2

K15505

DNA repair protein RAD5 [EC:5.6.2.-]

Organism

csat Camelina sativa (false flax)

Brite

KEGG Orthology (KO) [BR:csat00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:csat03400]
    104709287
DNA repair and recombination proteins [BR:csat03400]
Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    104709287

SSDB

Motif

Pfam:

SNF2-rel_dom UBA_RAD5A Helicase_C HIRAN zf-C3HC4_3 zf-C3HC4 zf-C3HC4_2 zf-RING_UBOX DEAD zf-RING_2 Prok-RING_4 ResIII RING_XB3-XBAT31 zf-RING_5 zf-C3HC4_4 zf-ANAPC11 zf-RING_4 CAMSAP_CKK

Other DBs

NCBI-GeneID:

104709287

NCBI-ProteinID:

XP_010424229

LinkDB

Position

8:complement(7102270..7117311)

AA seq 1018 aa
MGTKVSDDVVSTVRSVVGSDYSDMDIRRALHMANHDPTAAINIIFDTPSFSKPPDVVVAA
TPSPSGGSSNGGKKVYNGIKGCAFASVGANHRVEEEDESVDGGEESVSGNEWWFVGCSEL
AGLSTCKGRKLKSGDELVFTFPHSKGLKSETTPGKRGSGRGRPALRGSASDIVRFSTKDS
GEIGRIPNEWARCLLPLVRDKKIRIEGSCKLAPETLSIMDTILLFVSVYINSSMFQKHSA
TSFKAASNTAEESMFHPLPNLFRLLGLIPFKKAEFTPEDLSTRKRPLSSKDGSAVSAPLL
QLNKVKTLNQDENRNENEQCISDGDLDNIVGVGDSSGLKEMETPHKLLCELRPYQKQALH
WMTQLEKGNCTDEAATMLHPCWEAYYLADKRELVVYLNSFTGDATIHFPSTLQMARGGIL
ADAMGLGKTVMTISLMLSHPWKAEGEKVTSSSLDEFTSLPKATKFPGFDKKILEQKSVLE
NGGNLIVCPMTLLGQWKSEIEMHTKPGSLSVYVHYGQSRPKDTKLLSQSDVVITTYGVLT
SEFSAENSADNEGLYAVRWFRIVLDEAHTIKNSKSQISLASAALVADRRWCLTGTPIQNN
LEDLYSLLRFLRIEPWGTWAWWNKLVQKPFEEGDERGLKLVQSPIMLRRTKSSTDREGRP
ILVLPPADARVIYCELSESERDFYEALFKRSKVKFDQFVAQGKVLHNYASILELLLRLRQ
CCDHPFLVMSRGDTAEYSDLNKLSKRFLSGKSSGLERDGKDVPSVAFVQEVVEELRKGEQ
GECPICLEACEDAVLTPCAHRLCRECLLASWRNSASGLCPVCRKTVSKQELITAPTESRF
QVDVEKNWVESSKITALLEELESLRSSGSKSILFSQWTAFLDLLQIPLSRNNISFVRLDG
TLNQQQREKVLKEFSEDASIMVMLMSLKAGGVGINLTAASNAFVMDPWWNPAVEEQAVMR
IHRIGQTKEVKIRRFIIKGTVEERMEAVQARKQRMISGALTDQEVRSARIEELKMLFT

NT seq 3057 nt +upstreamnt +downstreamnt
atggggacgaaagtttcagacgatgtggtttccacagtcagatcagtcgtgggttccgat
tactcggatatggacataagacgggctttacacatggcgaatcatgatccaacggcagcc
atcaatatcatcttcgacactccaagtttcagcaaaccacctgatgttgttgtagccgcc
actcctagcccaagcggcggctcctctaatggagggaagaaggtctacaatggaataaag
ggctgtgctttcgcaagtgttggagcgaatcatcgcgtggaggaagaagatgagagtgtt
gatggtggtgaagagagtgtttcagggaatgagtggtggtttgtgggttgttctgaattg
gcggggttgtcgacatgtaaaggaaggaaattgaagtccggtgacgaattggtgttcacg
tttccgcatagtaaaggattaaagtctgagactacgcctgggaagcgcggctctggacgg
ggaaggccagctttgcgtggtagtgcttctgatatcgtcaggttctctacaaaggattca
ggagagattggtagaataccaaatgagtgggcacggtgtcttctaccgcttgtgagagac
aagaaaattaggatagaagggagctgcaagttggcgcctgaaacattgagtatcatggac
acaattcttctttttgtaagcgtgtacattaatagttccatgtttcaaaagcatagtgca
acatcatttaaggcagccagtaatacggcagaggagtcaatgttccatcctctcccaaat
ctctttcggttactcggtttgatcccctttaagaaggctgagtttactcctgaggacttg
tccactaggaagcgacctttgagttccaaggatggttctgctgtttcagctccgttgctt
cagttaaacaaggtcaagactctgaatcaagatgaaaacagaaatgaaaatgagcagtgc
atcagtgatggtgatcttgataatattgttggtgttggtgacagttctggattaaaggaa
atggaaactccacataaacttctgtgtgagcttcgtccatatcaaaagcaggcacttcat
tggatgacccaattggagaaaggaaattgcactgatgaggcagcaacaatgcttcaccca
tgttgggaagcgtactatttagcagacaagagggaacttgttgtctacctgaattctttt
actggtgatgctacaatacactttcctagcacccttcaaatggcaagaggaggaatttta
gcagacgcaatgggtctcggaaagaccgtaatgaccatatcccttatgctttcccatcct
tggaaagctgaaggagagaaagtgaccagcagttctttagatgagttcactagtctacca
aaggcaaccaaatttccaggctttgataagaagattcttgaacagaaaagtgtacttgaa
aatggtggtaacctgattgtatgtccgatgacacttttaggacagtggaagtcagagatt
gaaatgcatacaaagccggggtctctatctgtctatgttcattatgggcaaagcaggcca
aaggatacaaaacttctttcccagagtgatgtggtaatcaccacatatggagttcttaca
tccgaattttcggcagagaactcagcagacaatgaaggactttatgctgttcgatggttt
aggattgttcttgatgaggcacataccatcaaaaactcaaaaagccaaatttccttggct
tctgcagctctggttgctgatcggcgttggtgtcttacgggtactcctattcagaacaat
ctggaggatttgtacagccttctacggtttttgaggattgagccatggggaacttgggca
tggtggaataaacttgtccaaaagccatttgaagagggcgatgagagaggcctaaagcta
gtgcagtcacccatcatgcttaggagaaccaagtctagcacagatcgagaaggaaggccg
attcttgttctaccccctgctgatgcacgggtcatttactgtgaactctcggagtctgag
agggatttctacgaggcgctatttaaaagatccaaggtcaaatttgatcaattcgttgca
caaggcaaagttcttcataattatgcttccatcctggaactgcttttgcgtcttcgacag
tgttgtgatcacccatttttagtgatgagtcgaggtgatacagcggaatactctgatctg
aataagctctctaaacgtttccttagtggaaagtcttctggtctagaaagggatggaaaa
gatgtaccatcagtggcttttgttcaggaggtggtagaggaactgcgcaaaggagaacaa
ggagagtgtccaatatgccttgaagcatgtgaggatgccgtattaacaccatgtgctcat
agattatgtcgtgagtgtcttttggcaagttggcgaaattctgcttctgggttatgtcct
gtgtgtaggaaaactgtaagcaaacaagaactcatcacagcaccaaccgagagtagattc
caggttgacgtggaaaagaactgggtagaatcatccaaaatcactgctcttctggaagag
cttgaaagtcttcgttcttcaggctctaagagcattctctttagccaatggaccgctttc
ctcgatctcctccaaattcccctctctcggaacaacatttcatttgtccgtcttgatggc
actctaaatcagcagcaacgagagaaagtccttaaagaattttccgaggatgccagtata
atggtaatgttgatgtctctaaaagctggtggtgtcgggataaatctaacagctgcgtcc
aatgcttttgtcatggatccatggtggaacccagcggttgaggaacaggctgtcatgcgt
atccatcgtataggacagactaaggaagtcaaaatcagaagattcatcattaagggaaca
gttgaagagagaatggaggcggttcaggcgaggaagcagagaatgatctctggggcttta
acggatcaagaagtacgaagtgcgcgtatagaggaactcaagatgttatttacctga

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