Camelina sativa (false flax): 104725563
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Entry
104725563 CDS
T05044
Name
(RefSeq) nuclear pore complex protein NUP205 isoform X1
KO
K14310
nuclear pore complex protein Nup205
Organism
csat
Camelina sativa (false flax)
Pathway
csat03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104725563
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104725563
03036 Chromosome and associated proteins [BR:
csat03036
]
104725563
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104725563
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
104725563
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup192
RNAseD_HRDC_C
Motif
Other DBs
NCBI-GeneID:
104725563
NCBI-ProteinID:
XP_010442540
UniProt:
A0ABM0UKN6
LinkDB
All DBs
Position
2:15462771..15479200
Genome browser
AA seq
1863 aa
AA seq
DB search
MVSPKELVSIVHSSLLGTSRPTPTQRIELTHAIRNSFPSIQNLLLFSPPKPSDRAQVQSR
EIRLPDSLPISLDDQDVAISLKLSDELHLNEIDSVRLLVSANQEWGLVGRVPLEIQRLAT
GLWYTGRRDLTSTLYTLLRAVVLDQGLEPDLIADIQGLLEELIKTGLRQRLITLIKELNR
EEPSGLGGPLCERYLIDSRGALVERRAVVHRERLILGHCLVLSILVDRPGSKDVKDIFYV
LKDNAAQLTEGNDTISSQITFSLLFSLIITFVSDAISGLSDKSSMISQDASFRTDFQDIV
MASGSDLTADGFIGGIRLAWAVHLMLIYDGISGMDTIPTASTTDMRHICSCLESIFSKNV
FQFLLDNVLRTAAYQNDEEDMIYIYNAYLHKLASCFLSHPIARDKVKESKDMAMSVLNSY
RTCDSLDGSMQTEEAEKPLPFISLMEFVSKIYQKEPELLSGNDVLWTFVNFAGEDHTNFK
TLVAFLEMLCTLASTQEGASRVYELLQGTSFRSIGWPTLFDCIRIYDDKFKQSLQTSGAM
MPEFLEGDAKALVAYLNVLQKVVENGSPAERKNWFPDIEPFFKLLGYENIPPYLKGALRK
TIAAFVYVFPEMRDTIWAFLEQYDLPVVVGSQVGKSDQPSQVYDMQFELNEVEARREQYP
STISFLNLINALIAGEKDMTDRGRRFIGIFRFVYDHVFTPFPQRAYSDPCEKWQLVVACL
QHFHMILSMYDIQEEDLDGFTEHPQFLVSVETSSLQMQLPIIELLKDFMSGKALYRNLMG
ILQVGVNSIISERVSKTYGKILEKAVQLSLEILLLVFEKDLLVSDVWRPLYQPLDIILSQ
DHNQIIALLEYVRYDSLPQIQRSSVKIMNILSSRLVGLVPMLIKIDAANSLIEDYAACLE
VRLEEGEVVENSCDDLGVLIMQLLVDNINRPAPSITHLLLKFDLDAPVEGTVLQPKFHYS
CLKVILEMLEKLPNPDINFLLFEFGFQLLCELNLDPLTSGPTMDLLSSKKYQFFVQHLDT
IGVATLPKRTGSQALRISSLHQRAWLLKLLAIALHTGSGSSSAHLEACQSILSHLFGREV
TEAANELFSSSTYPQDGLDYAGTSSNSKSKALALIEILQFRSPDASMQLPQIVSSRKYDS
LVEDILGNRDTSVSGSIYYYSERGDRLIDLSSFSNKLWQKLHSGFPLVDCFPNVAELSEV
KETIQQLLKWGWKYNRNLEEQAAQLHMLAGWSQIVEVAACRRISSLDNRPDILYRILDAS
LSASASPDCSLKMAFVLTQVALTCIAKLRDDRFSFQGALSSDTVTCLDVMMVKHLSTGAC
HSVLFKLVMAILRHESSESLRRRQYALLLSYFQYCQHMIALDVPTSVVQFLLLNEQDGED
LDIQKIDKEQADLARANFLIIKKEAQGILDLVIKDASQGSEFGKTISLYVLEALVCIDHE
RFFLSQLQSRGFIRSCLGSISNISYQDGTHLLESQQRACTLESELALLLRISHKYGKSGG
QVLFSMGALEHISSCRAISFKGNMRRVDMKLQSDVGYDVQKQRTIITAVLRLVFALTSLV
ETSEFFEGRNKIVREVIEFIKGHQFLFDQLLREDFTQADDLLMEQIILAVGILSKVWPFE
ENDGYGFVQGLFDMMSKLFIVSPIKSISSQKGSELKLSQLRFSLTSYLYFLVTKNSLRLQ
VSDDSFDSSTKLRQPTLLLLASLLSHVTDSLERAAEKKSLLLHKIRDINELSRQDVDAII
TMCDCQEYVTPSDNIHKRRYIAMVEMCQIVGNRDQLITLLLQLAEHVLNIILIHLQDRSV
SSNERGSYGSKSHLQQDITVLCGKLSPTIERLALLNEGKVGHNLKVFQRLATTVKEMAIQ
NCI
NT seq
5592 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcgccgaaagagttagtgagcatagtacactcttcgctactcggaacgtcccgg
ccaactccaacgcagcgtatcgaactcactcatgccattcgcaactcatttccctctatt
cagaatctcctattattctcgcctccgaagccgtcggacagagcgcaagttcagtcccga
gaaattagactcccggattcgctgcctatatctttggatgaccaagatgttgctattagc
ttgaaactgagtgatgagcttcacctaaatgagatagattctgttcgtctgcttgtgtct
gcaaatcaggagtggggcttagtgggacgggtcccacttgagattcaacggcttgctact
ggactatggtatacagggagaagagatcttacatcaacgttatacacactcctgagggca
gttgttctggaccaggggcttgaacctgatcttatagctgacattcagggactcttagaa
gaactgatcaaaactgggctcagacaacggttgattactcttataaaggaactcaatcgg
gaggaaccttctggattgggtgggcccttatgtgagcgataccttattgactcaagaggt
gctcttgttgaacgaagagctgttgttcatagggaaagactgattctgggacattgcctt
gttctttcaattttggttgatagacctggttcgaaagatgtaaaggacatattctatgtt
ttaaaagacaatgcagctcaattaactgaaggaaatgacaccataagttctcagattact
tttagtcttctgttttctctcatcatcaccttcgtatcagatgcaatcagcggactatct
gataagtcatctatgatatctcaagatgcttcgtttaggacagactttcaggatattgtc
atggcttctggcagtgacctcactgctgatgggttcattggtggcataaggcttgcctgg
gctgtacatttaatgctgatatatgatggaatatctggaatggatacaattcccacggct
tcaacaacagatatgaggcacatatgctcctgcctggagtccatcttctcaaaaaatgtg
tttcagtttttgctagataatgttcttcgaactgcagcctaccagaatgatgaggaggac
atgatctacatatataatgcttatctgcacaagttagcctcttgttttttatctcaccca
atcgcaagagataaggtgaaggaatcaaaggacatggctatgagtgttttaaattcttac
cgaacttgtgattcacttgatggtagtatgcaaacagaagaggctgagaagccactgccc
ttcatttctcttatggagtttgttagcaaaatttatcagaaagaacctgaactactctct
gggaatgatgtcttgtggacatttgtgaattttgctggagaggaccacacaaattttaaa
actcttgtggctttcttggaaatgctgtgtaccttggcttccactcaggaaggtgcgtct
agagtttatgagttgctccagggtacatcatttcgcagtataggatggcccactttgttt
gattgtataagaatttacgatgataagttcaagcagtctcttcaaacttctggagccatg
atgccagagttcctggagggcgatgcaaaagctctggttgcatatctgaatgtacttcag
aaggttgttgagaatggtagtcccgctgagaggaaaaactggtttcctgatattgaacca
ttttttaagcttcttggttacgaaaacatccctccatatctaaagggtgctcttagaaag
accattgctgcctttgtttatgtctttccagaaatgagggacactatctgggcttttctt
gagcagtatgatctacctgttgttgtgggatcacaagttggaaagagtgaccaaccttct
caggtctatgatatgcagtttgagttaaatgaagtggaagcaaggagagaacaatatcct
tcaacaatatccttccttaatcttataaacgctctgattgctggagagaaagatatgact
gatcgtgggcgtagatttattggcatcttcaggtttgtgtatgatcatgtattcacccct
tttcctcagagggcatattcagatccttgtgagaagtggcagttggttgtggcatgcctt
caacattttcacatgatcttaagcatgtatgacattcaggaggaggatcttgatggattt
actgagcatccacagtttttggtgtcggttgaaacatcatcactgcaaatgcagctacca
attatagaattacttaaagatttcatgagtgggaaagctctttataggaacctcatgggt
attcttcaagttggagtcaattccatcatcagcgagcgagtgagtaaaacttatgggaag
atcttagaaaaggctgtacaactatctttagaaatcttactgctcgtattcgagaaggat
ttgcttgtttccgatgtttggcgtccgctgtaccagcctttggatataattctctcacaa
gatcataatcaaattattgccttgttggagtatgtcagatatgattctcttcctcagatt
cagcgatcttcagtcaaaatcatgaacattttaagttctcgtttggttggacttgttcca
atgctgatcaaaattgatgctgcgaattccttgatcgaggattatgcggcctgccttgag
gtacgacttgaagagggtgaagttgtagagaacagttgtgacgatctgggggtccttatt
atgcagcttctggttgataatatcaaccggcctgcaccaagtatcacacatttgcttctt
aagtttgaccttgatgcccccgtggaagggacagttttgcagcctaagtttcactacagt
tgtttgaaggtcattcttgaaatgctggagaaacttccaaaccctgatataaacttctta
ctctttgagtttggctttcagcttttgtgcgagttgaatttggatccattaactagtggt
ccaaccatggatctcttgagcagcaaaaaatatcagttttttgttcagcatcttgatacg
atcggtgttgctactcttccaaaaagaactggcagccaggcgctccgtatcagttccctt
catcagagggcatggctattaaagctcctagctattgcattgcatactggttctggaagc
agttcagctcacctagaggcatgtcagagcatactttctcatctttttgggcgggaggta
actgaagcagcgaatgaacttttttcgtccagtacatatcctcaggatggtcttgattat
gctggaactagttcaaacagtaaaagtaaggcattggctttgattgaaattcttcagttt
agatctcctgatgcttcaatgcagcttcctcaaattgtgtcaagccgaaagtatgactca
ctggtggaggacatacttgggaaccgtgatacctctgttagtggcagtatctactattat
tctgagcgtggtgatcggctaattgatttatcttctttcagcaacaaactctggcagaaa
ctacattctggatttcccctagtggattgttttccaaatgttgctgagcttagtgaagtt
aaagagacaatccaacagctgttgaaatggggctggaagtataaccgaaaccttgaggag
caagctgcccaacttcatatgttagctggctggtctcagattgttgaggtggctgcttgc
agaagaatatcttctcttgataatcggcctgacattttgtaccggatacttgatgcctct
cttagtgcttccgcgtctccagattgttcattaaaaatggcgttcgtacttactcaggtt
gcccttacctgcattgccaaacttcgtgatgatagattttcatttcaaggggccttgagt
tctgacaccgtgacatgtctagatgttatgatggtcaaacatttatccactggtgcttgc
cactcagttctatttaaacttgttatggcaattctaaggcatgagtcatcagaatccttg
agaaggcgccaatatgcattgcttttgagctatttccagtactgccagcatatgattgct
ctggatgtgccaacatcagttgtgcaattcttgttgcttaatgagcaagatggtgaagat
ttggatatccagaagattgacaaggagcaggctgatcttgctcgtgccaactttttaata
ataaagaaagaagctcagggcatcttggatctggtaatcaaggatgcaagtcaaggcagt
gaatttgggaaaacaatatcactctatgtgctggaagctcttgtttgcattgatcacgag
agattttttcttagtcagcttcagagcagaggtttcatacggtcttgccttggtagcatt
agtaatatctcctaccaggatggaacacatttgctggagtcacaacagcgagcatgtacc
ttagaatcagaacttgcattgctacttagaattagtcacaagtacggaaagtctggaggc
caggtactgttctccatgggtgcgctggaacacatctcttcttgtagagctatcagcttt
aagggaaatatgagacgggtggatatgaaacttcagagtgatgtaggatatgatgtgcaa
aagcaacgaactataatcactgctgtcctaagattggtgtttgctctaacctcattggtt
gagacctctgaattttttgaggggaggaataaaattgttcgtgaagtcattgagtttatc
aaaggacatcaatttctttttgaccaacttcttcgcgaagacttcactcaagcagatgat
ttattgatggagcaaattattcttgcagtaggaatattgagcaaggtctggccttttgaa
gagaacgatggatatgggtttgttcaagggctttttgatatgatgagcaagcttttcatc
gtctcccccattaagtcgatatcatcgcagaagggatcagagctcaaattgtctcaattg
cggttcagcttgacttcttacttatattttctggtgaccaaaaattctctgaggttacag
gtttcagatgattcttttgatagttccactaaactacgccaaccgacgttgctgttgctt
gcatctcttctttcacatgtgactgactccctcgagagagcagcagagaaaaagtcatta
cttcttcataagattagagacataaacgagctctctagacaagatgtagatgcgatcatc
acgatgtgtgattgccaagaatatgtcacaccgtccgacaacatacacaaaaggagatac
atagctatggttgaaatgtgccaaattgtgggtaacagggaccagttaatcaccttgtta
cttcaacttgccgagcatgtactaaatattatcctgatccatctccaagatagatccgtt
agttcaaatgaaaggggatcatatggttcaaaatcccatctacaacaagatattacagtt
ctctgtggcaaattgtcgcctaccatagagaggcttgcattactaaatgagggaaaagta
ggacataacctgaaggtgttccagagactggcaacgactgttaaagaaatggccatccaa
aactgtatatga
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