Camelina sativa (false flax): 104726410
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Entry
104726410 CDS
T05044
Name
(RefSeq) SNF2 domain-containing protein CLASSY 1-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104726410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csat03400
]
104726410
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
104726410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
SAWADEE
Motif
Other DBs
NCBI-GeneID:
104726410
NCBI-ProteinID:
XP_010443575
UniProt:
A0ABM0UN30
LinkDB
All DBs
Position
11:44741364..44754009
Genome browser
AA seq
1259 aa
AA seq
DB search
MKRKHYFDFDHPLNPCPFEVFCSGTWKAVEYLRIENGAMTMRLLENGQVLDDIRPFQRLR
LRSRKATLVDCTSFLRPGLDVCVLYQKDVTVDEETTEPVWVDARILSIERKPHESECFCI
FHVSVYIDQGCIGSEKHRMNRASVLMGLNQISILQKLCKEQSLNRYYRWRNSEDCTSLVK
TRLNLGKFLPDVSWLLVTSVLKNIVFQIRTFHEKMVYQIVADECSSSSLSAMNITVEDGV
FMSKVVLFNPAEDTHQDTDVKQEIEEEVMELRRSKRRSGRPDRFADSESQPDSKDGWVRM
MPYRYSTWTDLSDDDEDYDEEECDDDRDTDDDLYLPLSQLLGKKGSTKGLSKDKRREIVL
IDKTEMKKRKKTERIDRNRELSVIPFTPVFEPIPLEQFGFNANSLCGGSSGSHLMDEIDK
YRSRAAKYGKNKKFEMDEMESDLCWNGPLRNVVQKTNGQHSRIRSVSGNTGVSEEPQIYK
KRTLSAGAYNKLIDSYMSRIDSTIAAKNEATNVVEQLMGLKNAASSSMEAEKSSSEDDDE
EETSENEMLWREMELCLASSYILDDNEVRVDNEAFHKALGGCEHDYELNEEIGMCCRLCG
HVGTEMKHVSAPFAHHKKWTTETKQVNEDDINTTKVNQDGAESHNYTVPVASLDMPSAEE
SDNVWSLIPQLKRKLHLHQKKAFEFLWRNLAGSVVPAMMDPSSEKIGGCVISHTPGAGKT
FLIIAFLASYLKIFPGKRPLVLAPKTTLYTWYKEFIKWEIPVPVHLLHGRRTYCVAKENT
IQIEGIPKPSQDVMHVLDCLDKIQKWHAQPSVLVMGYTSFLTLMREDSKFAHRKYMAKVL
RESPGLLVLDEGHNPRSTKSRLRKALMKVDTDLRILLSGTLFQNNFCEYFNTLCLARPKF
VHEVLVELDQKFQTNQTEQKAPHLLENRARKFFLDIIAKKIDTKVGDERLQGLNMLRNMT
SGFIDNYEGNGSGSGSGDVLPGLQIYTLLMNSTDIQHRTLTKLQNIMSTYHGYPLELELL
ITLAAIHPWLVKTTACCTKFLNPQELSEIEKLKHDAKKGSKVMFVLNLVFRVVKREKILI
FCHNIAPIRLFLELFENIFRWKRGRELLTLTGDLELFERGRVIDKFEEPGGQSRVLLASI
TACAEGISLTAASRVIMLDSEWNPSKTKQAIARAFRPGQQKVVYVYQLLSRGTLEEDKYR
RTTWKEWVSSMIFSEEFVADPSQWQAEKIEDDVLREIVEEDKVKSFHMIMKNEKASTGG
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaaagcattactttgacttcgaccatccattaaatccatgccctttcgaggtg
ttctgctcggggacatggaaggccgtggagtacttaaggatcgagaatggagcgatgacg
atgcgtctcttggagaacggacaagtgttggatgatataagaccatttcagaggcttcgt
cttagatcaagaaaggccactttggtcgattgtacatcttttctaagacctggtctggat
gtttgcgttctctatcagaaagatgtcactgtggatgaagagactacagagccggtttgg
gtggatgcaaggatattatctatagagaggaagcctcatgaatctgaatgcttttgtata
ttccatgttagtgtgtatatagaccaaggctgcatcggttcggagaaacatagaatgaat
agagcttcggtactgatgggcctcaaccaaatctctatactccagaagctttgcaaggaa
caaagcttgaaccgctactacagatggagaaactctgaggactgtacttcgctggtgaaa
acaagactaaatctgggaaagttcttgcctgatgtttcttggttgcttgttacatcagtt
ttgaaaaacattgtgtttcagatcagaacctttcacgagaagatggtttatcagattgtg
gcggatgaatgctctagtagctctttgagtgcaatgaacatcacggtggaagacggtgtt
ttcatgtccaaagttgttttgttcaatccagctgaggatactcatcaagatactgatgta
aagcaggagatcgaagaggaggtaatggagctgcgtcgatccaagagaagaagtgggcgg
cctgatagattcgctgactctgagagtcagccagattcaaaggatggatgggtaaggatg
atgccatataggtacagcacatggactgatttaagtgatgatgatgaagattatgacgaa
gaagaatgtgatgatgatagagataccgatgacgatttatacttaccgttatcgcaatta
cttggaaaaaagggaagcacaaagggattaagtaaggataagcgaagagagattgttttg
atagacaaaacagagatgaagaagaggaaaaaaacagagagaattgatagaaatcgcgag
ctttcggttattcccttcactcccgtctttgaacctataccgttggaacagtttggtttc
aatgcaaatagtttgtgtggtggttcctctggaagtcatttgatggatgagatagataag
tatcgtagtagagcagcaaaatatgggaaaaataagaagtttgaaatggacgagatggaa
tctgatctatgttggaatggacccctcaggaatgtggttcaaaaaacaaatggacagcat
tcccgaatacggtctgtttctgggaacaccggagtttccgaggaaccacagatttataag
aagagaacattgagcgcaggtgcgtataacaagctgatagactcgtacatgagtagaatt
gattctacaattgcagccaagaacgaagcgaccaatgttgttgagcagttgatggggtta
aagaacgctgcaagctcttccatggaagccgaaaaaagttcgagtgaggatgatgatgag
gaagagacgtcagagaacgagatgctatggagggaaatggaactatgcttggcttcttct
tacattcttgatgacaatgaggtgagagtggataacgaggcgttccataaagcactcggt
ggttgtgaacatgattatgaattgaatgaagaaatcggaatgtgttgcagattgtgtggt
catgtaggaactgagatgaaacatgtttctgcaccttttgcgcatcacaagaaatggacg
acagagactaagcaagtcaacgaagatgacataaatactacgaaagtgaaccaagatgga
gctgagagtcataattacactgtaccagttgcttccttagatatgccctccgctgaagaa
agtgacaatgtttggtctcttatacctcagcttaagagaaaactacatttacaccagaaa
aaagcttttgagtttctctggaggaacctagccgggtcagtggttcccgcgatgatggat
ccgagttcagagaagataggtgggtgcgtgatttctcatactcctggagcaggcaaaaca
tttctgatcatagcttttcttgcaagctacttgaagatatttccgggtaaaaggccattg
gttcttgctccgaaaacaaccttgtacacatggtacaaggagttcatcaaatgggagatt
ccggtacccgttcacttgctccatggtcgtagaacctactgtgtggccaaagagaacacc
attcagatcgagggaattccaaaaccgagccaagatgttatgcatgttcttgactgtctc
gacaaaatccagaaatggcatgcacagcctagtgttcttgtaatgggttacacatcgttt
ctaacattgatgagggaagattcaaagtttgctcatagaaaatacatggctaaagtactg
agagagtctcctggattactggttctagacgagggacataacccgaggagtaccaagtcg
agattacgaaaggccttgatgaaagttgatactgatctgaggattctgctttcgggcaca
ttgtttcagaacaacttctgtgagtacttcaacactttgtgcttggctagacccaagttt
gttcacgaggttctagttgagttggatcagaagttccagacaaaccaaactgagcaaaag
gcgcctcacttgcttgaaaatagagctcggaaattcttcctcgacattatagccaagaag
attgacacaaaagtgggcgatgagcgcttgcaaggtctcaacatgttgaggaatatgacc
agtggtttcatcgataactatgaagggaacggaagcggaagcggaagtggtgacgttctc
ccaggtttgcagatttacacattgttgatgaactccacagatatacagcacagaactctt
accaaacttcagaacataatgtcgacttaccatggatatccactcgagctcgagttactc
ataacgttagcagctatccatccttggttggtcaaaaccactgcctgttgcaccaaattt
ctcaatcctcaggagctttccgagattgagaagctcaagcacgatgcaaagaaaggatca
aaagtcatgttcgtgcttaacctcgtgttccgggtggtcaagagggagaaaatcctcata
ttttgccacaacattgcgccgattcgcctgtttcttgagctgtttgagaatattttcagg
tggaagagaggccgagagctcctgaccttgacaggggatcttgagctgtttgagagaggc
agagtgatagacaaattcgaagaaccaggaggccagtcccgtgttctgctcgcttcgatc
acggcctgtgcagaaggcatcagtctaacagctgcatcacgggtgatcatgcttgattca
gagtggaatccttctaagacaaagcaagcaatcgcacgtgcattcagaccgggacagcag
aaagtggtgtacgtttaccagctcttgtccagaggaacacttgaggaagacaaatacagg
aggacaacctggaaagagtgggtctcaagtatgattttcagcgaagaatttgtggcggac
ccatctcagtggcaagctgagaagattgaggacgatgttcttagagaaatcgtggaggaa
gacaaagtcaaatcattccatatgatcatgaagaatgaaaaagcttcaacaggtggctaa
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