Camelina sativa (false flax): 104729714
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Entry
104729714 CDS
T05044
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00040
Pentose and glucuronate interconversions
csat01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104729714
Enzymes [BR:
csat01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
104729714
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
104729714
NCBI-ProteinID:
XP_010447044
UniProt:
A0ABM0UVP9
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Position
1:complement(2662433..2666162)
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AA seq
417 aa
AA seq
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MAHVTKLILFASALLLATLFIGVSSSRSNETWHEHAVENPEEVAAMVDMSIRNSTERRRL
GYFSCSTGNPIDDCWRCDRKWQLRRKRLADCSIGFGRNAIGGRDGRYYVVTNPNDDNPVN
PIPGTLRHAVIQEEPLWIIFKRDMVITLKQELIMNSFKTIDGRGVNVHIANGACLTIQYV
TNIIVHGIHIHDCKPTGNAMVRSSPSHYGWRSMADGDAISIFGSSHIWIDHNSLSNCADG
LVDAVMSSTAITVSNNFFTHHNEVMLLGHSDSYTRDKVMQVTIAYNHFGEGLIQRMPRCR
HGYFHVVNNDYTHWEMYAIGGSASPTINSQGNRFLAPTNPFAKEVTKREYTGQSKWKHWN
WRSEGDLFLNGAFFTRSGAGAGANYARASSLSAKSSSLVGTMTSYSGALNCRAGRRC
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggctcatgtcacaaaacttattctctttgcttctgcattacttctagcaactctcttt
atcggcgtcagttcatccaggtcgaatgaaacatggcatgaacatgcggttgagaaccca
gaggaagtagctgctatggtggacatgagcatacgaaacagcacagagcggagacggtta
ggttacttctcctgctccaccggcaacccaatcgacgattgctggcgttgcgaccgtaaa
tggcagctccgtcgcaaacgtttagccgattgctcaatcggattcggccgcaacgcaatc
ggaggccgagacggtcgttactacgtcgtaaccaaccctaatgacgacaacccggttaac
cccataccgggaacactccgtcacgcggtgatccaagaggaaccgctatggatcatcttc
aaacgcgacatggtgataaccttgaaacaagagctgatcatgaatagcttcaaaaccatc
gacggccgtggcgtcaatgtccacatcgctaatggcgcttgcctcacgattcagtacgtc
acgaacattatcgtacacgggattcatatacatgactgtaagcctacgggtaacgctatg
gttagaagctctccgtcgcattacgggtggagatcgatggctgatggtgacgctatctcg
atttttgggtcgagtcatatttggattgatcacaattcgctttctaattgtgctgatggg
cttgttgacgctgttatgagctccaccgccattactgtctccaacaatttcttcacccat
cacaatgaggttatgctgttggggcacagtgattcatacacaagagacaaggtgatgcaa
gtcacaattgcttacaaccattttggtgagggtttaatccagaggatgccgaggtgtagg
catggatatttccatgtagttaacaatgactacacgcactgggaaatgtatgcaattggt
ggtagtgctagtcccaccatcaacagtcagggcaatcgatttcttgctccaactaaccca
tttgctaaggaggttactaagagagagtacacaggacaatcgaaatggaagcactggaat
tggagatcagaaggagatcttttcttaaacggagcgtttttcacacgttctggagctgga
gctggagccaactatgctagagcttcgagtttatcagccaaatcatcctcacttgtaggc
acaatgacctcttactcgggtgctcttaactgcagagccggtcgtcgatgttaa
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