Camelina sativa (false flax): 104730729
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Entry
104730729 CDS
T05044
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
KO
K14411
RNA-binding protein Musashi
Organism
csat
Camelina sativa (false flax)
Pathway
csat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104730729
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104730729
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
104730729
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
SET1_RBD
RRM_RdRP1_2
Motif
Other DBs
NCBI-GeneID:
104730729
NCBI-ProteinID:
XP_010448232
UniProt:
A0ABM0UYN1
LinkDB
All DBs
Position
12:complement(7544153..7547361)
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AA seq
459 aa
AA seq
DB search
MNLEEQKMESGSDLGKLFIGGISWDTDEERLREYFGKYGDLVEAVIMRDRTTGRARGFGF
IVFADPSVAERVIMEKHIIDGRTVEAKKAVPRDDQQVLKRHASPMHLISPSHGGNGGGAR
TKKIFVGGLPSSITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVL
HKTFHELNGKMVEVKRAVPKELSSTPPNRSPLLGYGNNYGVVSNRSSANSYFNSFPPGYN
NNNLGSAGRFSPIGSGRNAFSSFGLGLNQELNLNSNFDGNTLGYSRIQGNQYFNGASPNR
YNSPIGYNRGDSAYNPSNRDLWGNRSDSSGPGWNLGVSGGGNNNRGNWGLSSVASDTNGY
GRSYGMGSGLSGLSFSGNTNGFDGSIGELYRGNSVYSDSTWQQQSMPHNQSSSNEFDGLS
RSYGFGIDNVGSDPSANASEGYPGNYNVGNRQTNRGIEA
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgaatctggaggagcaaaagatggaatcgggatcggatctgggaaagctcttcattggc
gggatttcatgggatacagatgaagaacggctgcgagagtattttggcaagtatggagat
ttggttgaagctgtgatcatgagagaccgtaccactggacgtgctcgtggctttggcttt
atcgtttttgcagatccttctgttgctgagagagtgatcatggagaaacacatcattgat
ggccgcacggtcgaggcaaagaaagctgtcccacgggatgatcagcaagtgctaaaacga
catgccagtccaatgcaccttatctcacccagccatggtggtaatggtggcggcgcacgg
acaaagaagatctttgttggaggtttaccgtctagcattactgaggctgagttcaagaac
tactttgatcagtttggtacaattgctgatgttgtggtgatgtatgatcataatacgcag
aggccaagaggctttggcttcatcacatttgattctgaagagtctgttgatatggttctc
cacaagaccttccatgagttaaacggcaaaatggtagaggttaaaagagcagtgccaaaa
gagctctcctctactcctcctaaccgaagcccacttcttggttatggtaacaactatgga
gtggtctctaacaggtcatctgctaatagctacttcaatagtttccctcctggttataac
aacaataatctaggctctgctggccggtttagtcctattggtagcggtagaaatgctttc
tctagctttggtctcggtttgaatcaagaactgaatttgaattcaaactttgatggaaac
actcttggctatagccggatccaaggcaaccaatacttcaacggtgcttcaccaaaccgt
tacaactctcctattgggtacaatagaggtgactctgcttacaacccgagcaacagagac
ttgtggggaaacagaagcgattcttctggtccaggttggaacttgggagtatccggtggt
ggtaataacaacagagggaactggggactttcttctgtggcgagcgataccaatggctat
ggaagaagctatgggatgggttctggactctctgggctgtcattttctggtaacacgaat
ggttttgatggctctataggggagttgtatagaggcaactcggtttatagcgactcaaca
tggcagcagcagtcaatgcctcataatcagtcttcttctaatgagtttgacggcttgtct
cgctcttatggctttggtattgacaatgtaggctcagacccatctgctaatgcctcagaa
ggttaccctggaaactacaatgtcggaaatagacaaacaaatagaggtattgaagcatag
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