Camelina sativa (false flax): 104730875
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Entry
104730875 CDS
T05044
Name
(RefSeq) DNA mismatch repair protein MSH3-like
KO
K08736
DNA mismatch repair protein MSH3
Organism
csat
Camelina sativa (false flax)
Pathway
csat03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
104730875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csat03400
]
104730875
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
104730875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
Motif
Other DBs
NCBI-GeneID:
104730875
NCBI-ProteinID:
XP_010448415
LinkDB
All DBs
Position
12:8302374..8308169
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AA seq
1097 aa
AA seq
DB search
MKKANMGKQKQQRISRFFAPKPKSPTQEPVPVAESSSPAPKISATVSFSPSKRKLLSDHL
SAASPKKTKLSSPHTQNPDLHRRFLQRFLEPSPEESVPETSSSSRKYTPLEQQVLELKSK
YPDVVLMVEVVYRYRFFGEDAEIAARVLGIYAHMDHSFMTASIPTFRLNFHVRRLVNAGY
KIGVVKQTETAAIKSHGANRGGPFFRGLSALYTKATLEAAEDISGGCVGEEGFGAQSNFL
VCVVDERVEPEAFGCGLEMSFDVRVGIVGVEISTGEVVYGEFNDNFMRSGLEAVILSLSP
AELLLGQPLSQQTEKFLLAHAGPTSNVRVERASLDRFRSGSAVDEVISLCEKISASNLVD
DKEVKVEAAEEGMSCLTVHTIMNMPNLTVQALALTLCHLKQFGFERILYQGASFRTLSSS
TEMTLSANTLQQLEVVRNNSDGSESGSLFHNMNHTLTVYGSRLLRHWVTHPLCNRNLISA
RLDAVSEISACMGSYSSSQNSNELVEGGSERTTVSPEFYFVLSSVLTSLSRSSDIQRGIT
RIFHRTAKATEFIAVMEAILLSGMQLQRLGIKQDCEMSMPSTTVKSSLLRKLISVVSSPA
VVDNAAKLLSALNKEGAVRGDLLDILITSSGQFPELAEARQAVLIVREKLDSSIASFRKK
LAIRNLEFLQVSGITHLIELPVGAKVPMNWVKVNSTKKTIRYHPPEIVAGLDELALATEH
LAIVNRASWDSFLKSFSRYYTDFQAAVQALSALDCLHSLATLSRNKKYVCPVFVDDCEPV
EINIQSGRHPVLETILQDNFVPNDTSLHAEGEYCQIITGPNMGGKSCYIRQVALISIMAQ
AGSFVPASFAKLHVLDGIFTRMGASDSIQHGRSTFLEELSEASHIIRTCSSRSLVILDEL
GRGTSTHDGVAIAYATLQHLLTEKRCLVLFVTHYPEIAEISNGFPGAVGTYHVSYLTSQK
DNSGFDHDDVTYLYKLVRGLCSRSFGFKVAQLAQIPPSCIHRAITMAAKLEAEVRAREKN
TRMESLGEGKGHEEDPVHGDREDSKSLEESVSGLDDFFADLKLALSEEENPLKSFEFLNR
AWKIAEESVLASLAKSN
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagcaaacatgggcaagcaaaaacagcagagaatttctcgattcttcgctccc
aaacccaaatccccaactcaggaaccggttccggtggctgaatcatcatcgccggcaccg
aagatatccgccactgtctctttttctccgtcaaagcgtaagcttctctccgaccacctc
tccgccgcgtcacccaaaaagactaaactttcttctcctcacactcaaaaccctgattta
caccgaaggtttctccagagatttcttgaaccctcaccggaggaatctgttcccgagacg
tcatcatcatcgaggaagtacacgccattggaacagcaggtgttggagctaaagagcaag
tacccagatgtggttttgatggttgaagttgtttacaggtacagattcttcggagaagac
gctgagattgcagcacgcgtgttgggtatttacgctcatatggatcatagtttcatgacg
gcgagtataccaacatttcgattgaactttcatgtgaggagattggttaatgcagggtac
aagattggtgtggtgaagcagactgaaactgcagctattaagtctcacggtgctaaccgg
ggaggtccttttttccggggactatcggcgttatataccaaagccacacttgaagcggct
gaggatataagtggtggttgcgttggtgaagaaggttttggtgcgcagagtaattttttg
gtttgtgttgtggatgagagagttgaaccggaggcatttggttgtggtctggaaatgagt
tttgatgttagagttgggattgttggcgttgagatttcaactggtgaagttgtttatgga
gagtttaatgataattttatgaggagtgggttagaggctgtgattttgagcttgtcacca
gctgagctgttgcttggccagcctctttcacagcaaactgagaagtttttgttggcacat
gctggacctacctcaaatgttcgagtggaacgagcctcactggatcgtttccgcagtggt
agtgcagtagatgaggttatttcattatgtgaaaaaatcagcgcaagcaacttagtagat
gataaagaagtcaaggtggaggctgctgaagaaggaatgtcttgtttgacagttcacaca
attatgaacatgccaaatctgactgttcaagcccttgccctgacattatgccatctcaaa
caatttggatttgaaaggatcctttaccagggggcttcatttcgcactttgtcaagcagc
acagagatgactctctcagccaatacgctgcaacagttggaggttgtgagaaataattca
gatggatcggaatctggctccttattccataatatgaatcacactcttacagtatatggt
tccaggcttcttagacactgggtgactcatcctctttgcaatagaaatctgatatctgct
cgccttgatgctgtttctgagatttctgcatgcatgggatcttatagttcttcccagaac
agcaatgagttggttgaaggaggttctgagagaacaactgtatcacctgaattttatttc
gttctctcctcagtcttgacatctttgtccagatcatctgatattcaacgtggaataaca
agaatctttcatcggactgctaaagccacagagttcatcgcagttatggaagctatttta
ctttcggggatgcaacttcagcggcttggcataaagcaagactgtgaaatgagtatgcca
tccacaactgtgaagtcttctcttttgagaaaattgatatctgttgtttcatcccctgct
gttgttgacaatgccgcgaaacttctctctgccctgaataaggaaggggctgttcgagga
gacttgctcgacatactaatcacgtccagcggccaatttcctgagcttgctgaagctcgg
caagcagttttaatcgtgagggaaaaactggattcctcgatagcttcatttcgcaagaag
ctcgcaattcgaaatttggaatttcttcaagtgtccgggatcacacatttgatagagctg
ccggttggtgccaaggtccctatgaattgggtgaaagtaaatagcaccaaaaagactatt
cggtatcatccccctgaaattgtagctgggttggatgagctagctctagcaactgaacat
cttgccattgtgaaccgagcttcgtgggatagttttctcaagagtttcagtagatactat
acagatttccaggctgccgttcaagctctttctgcgctggactgtttgcactccctggca
actctatctagaaacaagaagtatgtctgtcccgtgtttgtggatgactgtgaaccagtt
gagataaacatacagtctggtcgtcatcctgtattggagactatattacaagataacttt
gtcccaaacgacacaagtttgcatgcagaaggggaatactgccaaattatcaccggacct
aacatgggaggaaagagctgttatatccgccaagttgctttaatttctataatggctcag
gctggttcctttgtaccagcttcattcgctaagctgcacgttcttgatggtattttcact
cggatgggtgcttcagacagtatccagcatggtcgaagtacctttctggaagaattaagt
gaggcgtcgcacataatcagaacctgctcttctcgttcgcttgttatattagatgagctt
ggaagagggactagcacacacgacggtgtagccattgcctatgcaacattacaacatctc
ctaacagaaaagagatgtttggttctttttgtcacgcattaccctgaaatagctgagatc
agtaacggattcccaggtgctgttgggacataccatgtctcgtatctgacatcgcagaag
gataatagtggttttgatcatgatgatgtgacctacctatataaacttgtgcgtggtctt
tgcagcaggagctttggttttaaggttgctcagcttgcccagatacctccatcttgcata
catcgagccataaccatggctgcaaaattggaagctgaggtacgtgcaagagagaaaaac
acacgcatggaatcactcggagaaggaaaaggtcatgaagaagatccagtacatggtgac
cgtgaagattcaaaaagcttagaagaatctgtttctggtttagatgacttctttgcagac
ctgaaacttgctctctctgaagaggagaaccctttgaaatcattcgagtttttaaaccgt
gcgtggaagattgcagaagaatcagtgttagcaagtttggcaaaatcaaactaa
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