Camelina sativa (false flax): 104732455
Help
Entry
104732455 CDS
T05044
Name
(RefSeq) putative pectate lyase 14
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00040
Pentose and glucuronate interconversions
csat01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104732455
Enzymes [BR:
csat01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
104732455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
104732455
NCBI-ProteinID:
XP_010450305
UniProt:
A0ABM0V3Q8
LinkDB
All DBs
Position
12:22412023..22415785
Genome browser
AA seq
437 aa
AA seq
DB search
MVVLRRLFSISATLLIILALCVHANAVQETRESKHDSSRNTSTADNLSDGEWHDHAVKDP
DEIAAMVDMSIRNSTYRRKLGFFSCSTGNPIDDCWRCDKKWHRQRKRLAGCAIGFGRNAV
GGRDGRYYIVTDPSDHDPVNPKPGTLRYAVIQDQPLWIVFKRDMVITLSQELIMNSFKTI
DGRGVNVHIAGGACITIQYVTNIIIHGINIHDCKRTGNAMVRSSESHYGWRTMADGDGIS
IFGSSHIWIDHNSLSNCADGLIDAIMGSTAITISNNYMTHHNEAILLGHTDSYTRDKMMQ
VTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFLAPGNR
FAKEVTKRVNAGKGEWNDWNWRSQGDLMLNGAYFTSSGAGASANYARASSLAAKSSSLVG
MLTSSSGALKCRIGTLC
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggttgtccttagaagattattctcaatttcagcaactctacttataatcctagcactc
tgtgtccatgcaaatgcagttcaagaaacaagggaatcgaaacatgacagctcaagaaat
acatcaacggcggataatttatcagacggtgaatggcatgaccacgccgttaaagaccca
gatgaaatagcagcaatggtcgatatgagcatacgtaatagtacgtatcggagaaagcta
gggttcttctcctgttcaaccggaaaccccatcgatgattgttggcgatgcgataaaaaa
tggcatcgccagagaaaacgactagcaggttgtgctattggttttggtcgtaacgcagta
ggaggccgtgatggacgttactacattgttactgatccatctgatcatgatccggttaat
cctaaacctggtacgctacggtacgctgtgattcaagaccaaccactatggatcgtcttt
aaacgtgacatggtcatcactttaagccaagaactaatcatgaatagcttcaaaaccatc
gacggtcgtggcgtgaacgtacatatcgctggtggtgcatgtatcacgattcagtacgtt
acgaatattatcatccatgggattaatattcacgattgtaagcgaactggtaacgctatg
gttcggagttcggagagtcactacggttggagaacgatggctgatggtgatgggatctcg
atttttggatcgagtcatatttggattgatcataattctctttctaattgtgcggacgga
ttgatcgacgcaattatgggatctactgctattaccatctctaataattatatgactcac
cacaacgaggctattttgttggggcataccgattcctacacaagagacaaaatgatgcaa
gtaaccattgcatacaaccattttggagagggtcttatacagaggatgccaaggtgcagg
catggatacttccacgtagtaaacaacgattacacacattgggaaatgtatgcaattggt
ggaagtgctaaccctaccatcaatagtcaaggaaaccggttcctagccccgggaaaccgg
ttcgcgaaggaggtgacgaaacgggttaatgcagggaaaggagaatggaacgattggaac
tggagatcccaaggagacttaatgctcaatggtgcctacttcacttcatctggagctgga
gcttctgcaaattacgccagagcgtctagtttggctgctaaatcatcttcccttgtaggt
atgcttacctctagctctggtgctttgaaatgcaggatcggtacgctttgttaa
DBGET
integrated database retrieval system
