Camelina sativa (false flax): 104734499
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Entry
104734499 CDS
T05044
Name
(RefSeq) vacuolar protein sorting-associated protein 36-like
KO
K12190
ESCRT-II complex subunit VPS36
Organism
csat
Camelina sativa (false flax)
Pathway
csat04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104734499
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csat04131
]
104734499
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csat04147
]
104734499
Membrane trafficking [BR:
csat04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
104734499
Exosome [BR:
csat04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
104734499
Exosomal proteins of colorectal cancer cells
104734499
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
PH_TFIIH
Flagellin_N
Motif
Other DBs
NCBI-GeneID:
104734499
NCBI-ProteinID:
XP_010452394
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Position
13:complement(1890457..1893156)
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AA seq
440 aa
AA seq
DB search
MASGSSIGVGGLFVNAEVTTSGRPVLRRNEVECFLLSSVDFDSEDDPPRFTALKSGNLIL
TTHRLIWIPSEPNGAVPSSIPLAAVTHIFSHKKSIKSMFHSPRIRFQADPGSIVVTIVFR
GKGDFDCFLTKFWECWRGRAWDEEDKSETETSRSGGSATVAQGLYGNDGTVRMVGLAGIL
RKEQEQWESTDKSLQDAFQDLNALMSKAKEMVSLAEKMRQKLLSAPSSQNSSTDDEEMGS
KEEMQQWMLSVGIISPVTKESAGALYHQELSRQLADFVRIPLEQAGGMISLTDMYYHFNR
ARGTELISPDDLWQACTLWEKFDVPVMLRKFDSGVMVIQNKSHSDEEVMSRIRMLVTKTE
ALRAGVTASDAALTLKIAPAMAKEHLLTAETKGLLCRDMSPDGLRFYFNLFPEIDLTNLH
IVKDFGTYGEWVKATSILSV
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggctagtggaagcagcatcggagtcggtggtttgtttgtgaacgcagaggtgaccacg
agtggtagaccagtgcttcgacgcaatgaggtcgagtgtttcctcctctcttccgtcgat
ttcgattccgaagatgatccgccgcgattcaccgctttaaagtccggtaatcttatctta
accactcatcgtctcatatggattccatctgaaccaaacggagctgttccttcttcgatt
cctctcgccgccgttactcacatcttctctcataagaaatcgatcaagtctatgttccat
tcgccgagaatccgatttcaagcggatccgggttcgattgtggtgactattgtcttcagg
gggaaaggtgatttcgattgctttttgacgaaattttgggaatgttggagaggcagggcg
tgggatgaggaggataagagcgagactgagacttctcgttcaggaggatctgcaacggtt
gcgcaaggtttatatggaaacgatggaacagtgaggatggtgggattggctgggattttg
aggaaagagcaagaacagtgggagagcacagacaagagcttgcaagatgcttttcaggat
ttgaatgctcttatgagtaaggctaaagagatggtgagtctggcagaaaaaatgcgtcag
aagctcttgtctgctcctagtagtcagaacagttcaactgatgatgaagaaatgggttcc
aaagaagagatgcaacagtggatgttgagcgttggtattatctctccagttacaaaggaa
tctgctggcgccttgtaccatcaagaattgtcccgccagctggcagattttgtcagaatc
ccattagaacaagctgggggaatgatcagccttactgatatgtattaccacttcaatcgt
gctcgtgggacagagctgatctctccagacgatttatggcaagcttgtaccctctgggag
aaatttgatgttccagtaatgctgcggaagtttgatagcggtgtgatggtgatccaaaac
aagtcccatagtgatgaggaggttatgagtagaatcagaatgcttgtgaccaaaactgaa
gctttaagagccggagtcactgctagtgatgcagctttgacactgaagatcgccccagcc
atggctaaggaacatctacttactgcagagaccaaaggtttgctgtgtagagacatgagc
ccagacgggcttcgattctatttcaacctgtttccagagatcgatctcaccaatctacat
atagtcaaggactttgggacgtacggtgaatgggtcaaagcgaccagtatcttgtccgta
tga
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