Camelina sativa (false flax): 104745887
Help
Entry
104745887 CDS
T05044
Name
(RefSeq) probable polygalacturonase At3g15720 isoform X2
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00040
Pentose and glucuronate interconversions
csat01100
Metabolic pathways
Module
csat_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104745887
Enzymes [BR:
csat01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
104745887
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Beta_helix
Pectate_lyase_3
NosD
Motif
Other DBs
NCBI-GeneID:
104745887
NCBI-ProteinID:
XP_010465559
LinkDB
All DBs
Position
15:7460641..7463504
Genome browser
AA seq
423 aa
AA seq
DB search
MHWMLLNSERLEMELQTIHSGTGDGQLVVPAGMTFMLQPLKFQGSCKSAPIFVQILGNLV
ASSKGNWKGDKDQWILFADIEGLVVEGDGEINGQGSSWWEHKGSRPTALKFKSCNNLRLS
GLTHVDSPMAHIHINDCNYVTISSLRINAPESSPNTDGIDVGGSSNVVIQDCLIATGDDC
IAISSGTSNIRISGIDCGPGHGISIGSLGKDGETATVENVCVQNCNFRGTTNGARIKTWQ
GGSGYARMITFHGITLDNVENPIIIDQLYNGGDSDKAKDHKSSAVEVSNVMYSNFVGTSK
SEYGVDFRCSERVPCTDIFLRDVKIATASSGSGQVAQGQCLNVRGASTLAVPGLECLALT
ANMLSSPEQTCMLAQSVQPRTQPMQDPIWDFESRGKRLIVSNTVLFSFISLVTYSFRLLM
ENF
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgcattggatgttactcaattcggagcggttggagatggagttacagacgattcacagc
ggaacaggagatgggcagcttgtcgtgccggcagggatgacatttatgttacagcccctg
aagtttcaaggctcttgcaaatcggcccctatttttgtgcagattttaggcaatctggtt
gcatcgagtaaaggaaattggaaaggagacaaagatcaatggattctttttgcagacatt
gaaggacttgtggttgaaggtgacggcgaaattaacggccagggttcgagctggtgggaa
cacaaaggctccagacctaccgcattgaagttcaagagctgcaacaaccttagattgagt
ggattaacgcacgtagatagtccaatggctcacattcacattaacgattgcaactacgtg
accatctcaagtctccggataaatgcgccggaatcaagtcctaacactgatggcatcgac
gtaggcggttcatccaacgttgtcatccaagactgcctcatcgcaaccggtgatgattgc
atagcgataagttcagggacgtcaaacatccggatttccggtatagactgcggaccaggc
catggaataagcataggaagcttgggaaaagatggggagacagctaccgttgagaatgta
tgtgtccaaaactgtaacttcagaggaactacgaatggggctcggatcaaaacttggcag
ggcggatcgggttacgcaagaatgattacattccatggaataactctagacaatgtagaa
aatccaattattatcgatcagctctacaacggaggagattctgataaagccaaagatcat
aagtcgtcggcagtggaagtgagcaatgtgatgtatagtaatttcgttgggacgtcgaag
tcagagtacggagttgacttcaggtgcagcgagagagtaccgtgcacagatattttcttg
agagacgtgaaaatagcaaccgcatcatcaggatcaggacaagtcgcacaaggacaatgt
ttaaacgtgagaggtgcgtccacactcgctgtcccaggtctagaatgcttagcccttacc
gcaaatatgttgtcatcgccggaacaaacttgcatgttggcacaatcagtgcaaccaaga
acacaaccgatgcaagatccaatatgggattttgaaagcagagggaaacgacttatagtt
tccaataccgtattattttcatttatctctttggttacatacagttttagattattaatg
gaaaacttctaa
DBGET
integrated database retrieval system