Camelina sativa (false flax): 104766998
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Entry
104766998 CDS
T05044
Name
(RefSeq) transportin-1-like
KO
K18752
transportin-1
Organism
csat
Camelina sativa (false flax)
Pathway
csat03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104766998
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104766998
03009 Ribosome biogenesis [BR:
csat03009
]
104766998
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
104766998
Ribosome biogenesis [BR:
csat03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
104766998
Pre-60S particles
104766998
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
HEAT_GCN1
TPR_IPO5
IBN_N
TPR_IMB1
HEAT_MROH2B_C
HEAT_2
TPR_DNAAF5
TOR1L1_N
HEAT_EF3_N
CEP104-like_TOG
Vac14_Fab1_bd
CLASP_N
MMS19_C
Ltn1_1st
PSME4_C
HEAT_DAAF5
Usg
Motif
Other DBs
NCBI-GeneID:
104766998
NCBI-ProteinID:
XP_010489304
UniProt:
A0ABM0XQA4
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Position
19:23244882..23255552
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AA seq
893 aa
AA seq
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MAATAVVWQPRDDGLAEICALLEQQISPSSVVDKSQIWQQLQHFSQFPDFNNYLVFILVR
AEGKSIEVRQAAGLLLKNNLRGAYPSMVQENQKYIKSALLPCLGAADRNIRTTVGTIISV
IVNIEGVSGWSELLPALVTCLDSNDLNHMDGAMDTLSKICEDIPHVLDSEVPGLAERPIN
IFLPRLFQFFQSPHASLRKLALGSVNQYIIIMPAALFHSMDKYLQGLFVLANDPVAEVRK
LVCAAFVHLTEVLPSSIEPHLRNLMEYMLQVNKDPDEEVSLEACEFWSAYCDAQLPPENL
KEFLPRLIPVLLENMAYADDDESLLDAEEDESQPDRDQDLKPRFHTSRLHGSEDFDDDDD
DDDSFNVWNLRKCSAAAIDVLSNVFGDDILPALMPLIQTKLSASGDEAWKDREAAVLALG
AIAEGCMTGLYPHLSEIVAFLLPLLDDKFPLIRSISCWTLSRFGKYIIQESGNSKGYEQF
EKVLLGLLRRLLDTNKRVQEAACSAFATLEEDASEELLPHLGVILQHLMCAFGKYQRRNL
RIVYDAIGTLADSVRGELNKPAYLEILMPPLVAKWQQLSNSDKDLFPLLECFTSISQALG
VGFAPFAQPVFHRCMDIIQLQQLAKVDPASAGAQYDREFIVCSLDLLSGLTEGLGSGIES
LVSQSNLRDLLLKCCIDEAADVRQSAFALMGDLARVFPVYLQPRLLEFLEIASQQLSANL
IRENLSVANNACWAIGELAVKVRQEVSPIVANVVSSLGLILQHGENVNKALVENSAITLG
RLAWIRPDLVAPHMEHFMKPWCLALSMVRDDIEKEDAFRGLCSVVKANPSGGVSSLVFIC
QAIASWHEIRSEDVQNEVTQVLNGYKQMLGNSWAECLSALKTPVKERLARYQV
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgacggcggtggtctggcaaccccgagacgacggtctcgccgagatctgcgct
cttctcgaacaacagatttctccttcctccgtcgtcgacaagtctcagatttggcagcag
cttcaacacttctctcagttccctgatttcaacaactatctcgtcttcatcctcgttcgc
gctgagggtaagtccatagaggttcgccaagctgctggcttgcttctgaaaaataatttg
aggggtgcttatccatccatggttcaagaaaaccaaaaatacatcaagtcagcgttgttg
ccttgtctgggagcagcggacaggaatatacggactacagttggaactatcatcagtgtt
attgttaatatcgaaggagtttctggatggtctgagcttttgccagctcttgttacttgc
ttagacagtaatgatctaaatcacatggatggtgcgatggatacattgtcaaagatttgt
gaggatatcccgcatgtcttggattcagaagtgcctggcttagcagagcgccctatcaac
attttcttgcctaggctatttcagttttttcagtcaccccatgcttcactgaggaagctt
gccctgggttctgtgaaccaatatatcataataatgcctgctgctttgttccattcaatg
gataagtaccttcagggtttgtttgtcctcgccaatgatcctgtagcagaagtcagaaaa
ttggtctgcgcagcatttgtgcacctcacggaagtcctcccctcatctatagagccgcat
ctcaggaatctcatggagtacatgttacaagttaacaaagaccctgatgaagaagtgtct
ctcgaagcatgtgaattttggtctgcatactgtgacgctcagctgccgccagagaacttg
aaagagtttctgccacgcctaattccagtgttgcttgaaaacatggcttatgcagatgac
gacgagtcccttttggatgcagaggaagatgagtctcaaccagacagagatcaggatttg
aaacctcgttttcatacatcaagacttcatggatcagaggattttgatgatgatgatgat
gatgatgactcgtttaacgtgtggaatttaagaaagtgtagtgcagcagctattgacgtt
ctctccaatgtatttggagatgacatccttccagcactcatgcccctaattcagacaaaa
ttgtcagcttctggtgatgaggcctggaaagatagggaagctgctgttttggctctcggg
gctattgctgaaggctgcatgactggtctttaccctcacttgtctgagattgtagcattt
cttcttcctcttttagatgataaattcccgctaatacgaagcatatcttgctggacgctt
tctcgatttggcaagtatattatccaggaaagtggcaattcgaagggttatgaacagttt
gagaaagtgcttttgggtcttctccgcagactcttggatacaaacaagcgggtccaggag
gctgcctgttcggcttttgcaactcttgaagaggatgcttctgaagagttactgccacac
ctgggggtgatactgcagcatctgatgtgcgcttttggaaagtatcagagacggaactta
agaattgtttatgatgctattggaacactggcagattcagttagaggagagctgaacaag
cctgcttatcttgagattctgatgcccccactggttgcaaagtggcaacaactttcaaac
tcagataaagatctatttccattgctagaatgcttcacatccatttctcaggctttaggt
gttggattcgctccatttgctcagcctgttttccatagatgcatggatatcatccaactg
cagcagctggctaaggttgatcctgcttctgctggggctcagtacgacagggaattcatt
gtttgttctcttgatctgctttctggacttactgaaggacttggcagtgggatagagtct
ctggtttcacaaagtaatctaagggatctgcttctcaagtgttgcattgatgaagctgct
gatgtcagacaaagtgcttttgccttaatgggtgatcttgcaagagtattcccggtctat
ctacaaccccgcctgcttgagttccttgaaattgcaagccagcaactgagtgcaaacctc
attcgagaaaacctttctgtcgcaaataatgcttgttgggccattggagaattagcagtc
aaggttcgtcaagaagtctctccaattgtggccaacgttgtctcttccctaggcctgatt
cttcaacatggagagaatgtcaataaagcactagttgagaacagtgcaattacccttggg
agactagcatggattcgtccagaccttgtagcaccacacatggagcactttatgaagcca
tggtgcctggcattgtcgatggtccgtgatgacattgagaaagaagatgcatttagagga
ttatgctcagtggttaaagcgaatccatcaggaggtgtcagctcactagttttcatatgc
caagccatcgcaagttggcatgaaataagaagtgaggacgtacagaacgaagtcacccaa
gtactgaacggctataaacagatgctgggaaactcatgggcggaatgtttatctgctttg
aaaactcctgtaaaggaaaggcttgcgagatatcaagtgtag
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