KEGG   Camelina sativa (false flax): 104768807
Entry
104768807         CDS       T05044                                 
Name
(RefSeq) splicing factor SF3a60 homolog
  KO
K12827  splicing factor 3A subunit 3
Organism
csat  Camelina sativa (false flax)
Pathway
csat03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104768807
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:csat03041]
    104768807
Spliceosome [BR:csat03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    104768807
 Complex B
    104768807
 Complex C
   U2 SnRNP specific factors
    104768807
SSDB
Motif
Pfam: SF3a60_Prp9_C SDE2_2C SF3A3 SF3a60_bindingd
Other DBs
NCBI-GeneID: 104768807
NCBI-ProteinID: XP_010491162
UniProt: A0ABM0XUD8
LinkDB
Position
20:complement(2466726..2470565)
AA seq 505 aa
MSSTLLEQTRSSHEEVERLERLIVQDLQTEPPSSKDRLVQGHRVRHMIESIMLTTNKLVE
TYEDKDGAREDEIAALGGGQAAFSAFYDRLKEIREYHKRHLSGRLVDANEDYEALLKEEP
VISFSGEEGVGRYLDLHDMYNQYINSRFGERVEYSAYLDVFSRPEKIPHKLKLSRQYRKY
MEALLEYLVDFFQRTEPLQDLDRILSRVETDFEEQYANGKVEGWENHSQESELISSQHTV
IDLDYYTTVEELLDVGPEKLKEALGALGLKVGGTPQQRAERLFLTKHTPLEKLDKKHFAK
PLHNGKQNGDVKSTQQSENAKEIALTETKVKKLCQLLDETIERTKQNIVKKQSLTYEEME
GEREGEEANAESESDDEDGDIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCDICGDYSY
WGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELWKRIQERQGENKWRPELE
EEYEDREGNIYNKKTYSDLQRQGLI
NT seq 1518 nt   +upstreamnt  +downstreamnt
atgtcttcgactctcctcgagcaaactcgctccagtcatgaagaggttgaaaggttggag
cgattaattgttcaagatctacagactgagccaccttccagcaaggacagattggtccag
ggacatcgtgttcgtcacatgattgaatctatcatgctcaccactaacaaacttgttgaa
acctatgaggataaggatggggcaagggaagatgagatagcagcgcttggtggtggccag
gctgcgtttagtgcattttacgatcgtttgaaagagatacgtgaatatcataaaaggcac
ctttctggacgtcttgttgatgctaatgaagattatgaagcactcctgaaggaggaacct
gttatttcgttcagtggagaggaaggtgttggtcggtacttggacttacatgatatgtat
aaccagtacatcaactctagatttggggaaagggttgaatattctgcttaccttgatgtt
ttttctagaccagagaaaataccgcataaactaaagctatcgaggcaatacaggaagtat
atggaagcactgctagagtacttggtcgactttttccagcgaaccgagccattgcaagat
cttgaccgcatactttctagggttgaaactgatttcgaagagcaatacgcgaatggaaaa
gtagaaggctgggagaaccatagccaggaaagtgagcttatttcatctcagcatactgtc
atagatctggattactacactacagtcgaggaactgctagatgtgggtcctgaaaagcta
aaggaggcattgggggcattaggactgaaggttggtggtacaccgcagcagcgtgccgag
agacttttcctgacaaagcatacgcctttggaaaagctggataagaaacattttgccaaa
cctctacacaatgggaaacaaaacggagacgtaaaatcaacgcagcagtcagaaaatgct
aaagagattgcactaacagagaccaaagtgaagaaactctgccaattacttgatgagaca
atcgaaaggacaaaacaaaacattgtaaagaaacagtccttgacatatgaagaaatggag
ggagaacgagaaggggaggaagctaatgccgagtcagaaagtgatgacgaggacggtgat
atttacaatccgctgaagctgccaatgggttgggatgggaagcctataccatactggctc
tacaaacttcatggcctgggccaggagtttaaatgcgacatatgtggggactatagttac
tggggaagaagggcttttgagagacattttaaagaatggagacaccagcacggaatgcgt
tgcctaggaatacctaacacaaagaacttcaatgagatcacttcaattgaggaagcgaaa
gaattgtggaagaggatacaggagaggcaaggagagaacaaatggaggccagaactcgaa
gaggagtatgaagatcgtgaaggtaacatttacaacaagaagacttactctgatctccag
cgccaaggtctcatctga

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