KEGG   Camelina sativa (false flax): 104769757
Entry
104769757         CDS       T05044                                 
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1 isoform X1
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
csat  Camelina sativa (false flax)
Pathway
csat03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    104769757
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:csat03400]
    104769757
DNA repair and recombination proteins [BR:csat03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     104769757
SSDB
Motif
Pfam: Tyr-DNA_phospho FHA_2 FHA
Other DBs
NCBI-GeneID: 104769757
NCBI-ProteinID: XP_010492342
UniProt: A0ABM0XXC0
LinkDB
Position
20:complement(6872542..6876113)
AA seq 631 aa
MIHFNLRHLSSSMAHSQVAYLIPLKADLKEDDSSPRITLSEGPNIIGRGNVSIADKRLSR
KHISIIVSSSGSVSLSVEGTNPVVIRSSGDGERKKIKPREEVLVSNDDLIELIPGHHFFK
LVLLPTENRGCHERAAKKARKGEAQGDDDDDVEAIRRFVPPNEILPSTFRLLSVNGLPDW
ANTSCVSINDVIEGDVVAAILSNYMVDVDWLMSACPKLANIPQVMVIHGEGDGRQEYIQR
KKPANWSLHKPRLPISFGTHHSKAIFLVYPRGVRVVVHTANLIHVDWNNKSQGLWMQDFP
WKDDDNKDPPKCCGFEGDLIDYLNVLKWPEFTASLPGRGNVKINAAFFKKFDYSNATVRL
IASVPGYHTGLNLKKWGHMKLRSILQECIFDREFRRSPLVYQFSSLGSLDEKWLAEFRDS
LSSGITEDKTPLGPGDPLIIWPTVEDVRCSLEGYAAGNAIPSPLKNVEKPFLKKYWAKWK
ADHSARSRAMPHIKTFTRYSDQKLAWFLLTSSNLSKAAWGALQKNNSQLMIRSYELGVLF
LPSPVKTQGCKFSCTEDNTSTMKAKQETKDEVEKRSKLVTMSWQGNRDSPEIISLPIPYQ
LPPKPYSTEDVPWSWDRGYSKKDVYGQVWPR
NT seq 1896 nt   +upstreamnt  +downstreamnt
atgattcacttcaacctcaggcacttgtcttcttcaatggctcactctcaggttgcgtat
ttgattccattgaaagcagatttaaaggaagacgattcatctccaaggataactttatcc
gaaggtccaaacatcattggccgtggaaacgtttcaatcgctgataaacgtctcagccgt
aaacacatctccatcatcgtttcctcgtctggctcagtgtccttgtctgtggaaggaacg
aatccggtggttattaggtcttctggcgacggcgagaggaagaaaataaaaccccgtgaa
gaggttttagtaagtaatgatgatcttattgagttgatccctggtcatcatttctttaag
ctagttttgctacctactgagaacagaggatgccatgaaagagctgctaagaaagctcga
aagggtgaagcacaaggtgatgatgatgatgatgtagaggcgattcgtcgatttgttcca
cctaatgagatactaccttcaacgtttaggcttttgagtgttaatggattgcctgattgg
gctaatacctcttgtgtttccattaatgatgtcattgagggagacgttgttgctgcaatc
ttatcgaattatatggtcgatgtagactggttgatgtcagcttgcccgaaactggccaac
attcctcaggttatggtcatccatggagaaggtgatggtaggcaagagtatatacagagg
aagaagccagctaattggagtcttcataagccccggttacctatttcatttggaacacac
cattcaaaagctatatttcttgtctatcctcgaggtgtgagagttgttgtacacacagca
aatctgatccatgttgattggaacaacaagagccaaggtttgtggatgcaagatttccct
tggaaagatgatgataataaagatccacctaaatgttgtggattcgaaggtgatcttatc
gattacctcaatgttcttaagtggcctgagtttactgcaagcttacctggtcgtggtaat
gtgaagattaatgcagccttcttcaaaaagtttgattattccaatgctacggttcgacta
attgcatcggtccctggataccacactggtttaaacttgaaaaaatggggacacatgaag
ctacggagtatccttcaagaatgcattttcgatagagagttccgcagatcccctttagtt
tatcagttttcttcacttggctctttagacgagaagtggttggctgaatttagagattct
ttgtcttctggtataacagaggacaaaacgcctcttggtcccggggatccattgataata
tggcctacagtagaagacgtcaggtgttctttagagggttatgctgctggcaatgcaatt
ccgagcccattgaagaacgtagagaaaccgttcttgaaaaaatattgggctaaatggaaa
gcggatcatagtgctcgcagtcgtgcaatgccacatataaagacgttcacacgttacagc
gaccagaagctagcatggttcttgctaacctcatctaatcttagcaaagcggcctgggga
gcacttcagaaaaacaattcccagttgatgatacgttcctacgagttgggcgtcctgttt
ctaccatctccagtaaaaacacaaggttgtaaattttcatgcacagaggacaatacaagt
actatgaaggcaaaacaagagacgaaagacgaggtagagaagaggagtaagctagtgaca
atgtcctggcaaggaaatagagattcgcctgagataatctcattaccaattccttatcaa
ctacctcctaagccatactcaaccgaagatgttccgtggtcatgggaccgaggctactcg
aagaaggatgtgtatgggcaagtctggccaagatag

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