KEGG   Camelina sativa (false flax): 104770085
Entry
104770085         CDS       T05044                                 
Name
(RefSeq) splicing factor SF3a60 homolog
  KO
K12827  splicing factor 3A subunit 3
Organism
csat  Camelina sativa (false flax)
Pathway
csat03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104770085
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:csat03041]
    104770085
Spliceosome [BR:csat03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    104770085
 Complex B
    104770085
 Complex C
   U2 SnRNP specific factors
    104770085
SSDB
Motif
Pfam: SF3a60_Prp9_C Surp SDE2_2C SF3A3 Desulfoferrod_N DUF4460 tRNA-synt_1d
Other DBs
NCBI-GeneID: 104770085
NCBI-ProteinID: XP_019097214
UniProt: A0ABM1RDX6
LinkDB
Position
20:8702917..8707653
AA seq 730 aa
MSGSTSSLGAPCAYSNHELEELRSKHEHLERLEQLIMEELKTEQRTPMEKLLQGHRLRRL
TDSIILKTRELVQTDEKEDLDAVLSAILSRLEQSYDKKDGEIKYAIAPHGDPTATFTNLS
DAFFSRLEELHEYHRIHPSECLADAHEALLKDEPVIGFSVEECSGRFLDLHDMYNKYISS
DFGERVEYSAYLDVFSQPDKIPRKLKLSRQYAEYMEALLEYLIYFFQGTEPLQDLDRILH
KVETDFEEQYAEGKVKGGENHHDQEHEPNPSHPAVVDLDCYTRVEELVDVELEKLTKALV
ALGLSTSGTQQQCAERLFLTKQARLEKKHSLMEAKMKKLCDLLDEAIERTKQNVEKKRKA
LTFEVMEEEEAHTESESVAMGWDGKPIPYWLYKLGLGQEYKCEICGNYSYGGKRAFERHF
EEWRHARGLLRLGIKGKVNRITLVEEAKDLWNTLPESQKVRLRADGNLRPLPRLKDQEIK
ESNPRQAPTGVAIPPPDIKTMVERTAFFLAREGLETERKVTDKYENEAIFSFLNSSDPYH
AFYQHRLTEYRAQNQDGAQATGSDATPTTNPGYGDSRTFLPAEFMVPPPPLESHKFAYRL
PVGMTPEELDIIKLTAQFLARYGNVFWEGFKKSVSMDPQFEFIRNPTDGRFTLFSGLVQA
YGEVLCPQILKEKLRKKAAADMETILENCFHRVQWDRSRRSIGRRNGRSMGRKKVASERR
RIRIQDLHIF
NT seq 2193 nt   +upstreamnt  +downstreamnt
atgtccggctcaacttcttcactcggggctccttgtgcctatagcaatcacgagctcgag
gaacttcgctccaaacacgagcaccttgaaaggttggagcaattgattatggaagagcta
aagacagaacaacggactccgatggagaaattgttgcaaggccaccgtctccggagactg
accgattctatcatacttaagactcgggaacttgttcaaaccgatgaaaaggaggatctt
gatgcagttttatctgcaattttgtctcgactggaacagtcctatgacaagaaggatggg
gagattaaatatgcaatagctccgcatggtgacccgactgcaacgtttacgaatttgtct
gatgcatttttttctcgactggaagagctacatgaatatcatagaattcatccttctgaa
tgccttgctgatgctcatgaagcactcctcaaggatgaaccagtaattgggttcagtgta
gaggaatgctctggtcggttcttggacttgcatgatatgtataacaaatacatcagctct
gattttggggaaagagttgaatattctgcttatcttgatgttttttcccaaccagataaa
ataccgcgtaaacttaagctgtcgaggcaatacgcagagtatatggaagctctgctagag
tatttaatttactttttccaaggaactgagccgctgcaagatttggacagaatactccac
aaggttgaaactgattttgaagagcagtatgcagaggggaaagtgaaaggcggggagaac
caccatgaccaggaacatgagcctaatccatctcatcctgctgttgtggatcttgattgc
tataccagagttgaggaactggtagatgtggagcttgaaaagctaacgaaggcgttggtg
gcattgggactgagcactagtggtactcagcagcagtgtgctgagagacttttcctgacg
aagcaagcgcgactggaaaagaaacattcgctaatggaggccaaaatgaagaaactctgc
gatttacttgatgaggcaatcgagaggacaaaacaaaacgtagaaaagaagagaaaggct
ttgacatttgaagtgatggaggaagaggaagctcatacagagtcagaaagtgtagcaatg
ggttgggatgggaagccaataccatactggctctacaaactcggccttggccaggaatat
aaatgtgagatttgtggaaactatagctatgggggaaaaagggcttttgagagacatttt
gaagaatggcgtcacgcacgcggattgcttcgtttgggaatcaaagggaaggtcaacaga
atcactttggttgaggaagcaaaagatctgtggaatacgttaccagagagtcaaaaagtg
cggctccgggctgacgggaatctcagaccacttcctcgtttgaaggatcaggaaatcaaa
gagagcaatccacgtcaagctccaacgggtgtagcaattccacctccagatatcaaaact
atggtagagagaactgcatttttcctggcaagagaagggttggagactgagaggaaggtc
acagacaaatatgagaatgaagcaatattcagctttttgaatagctctgatccttatcac
gcgttttaccagcataggcttactgagtaccgtgctcagaatcaagatggagctcaggct
actggttcagatgctacaccaactacgaatccaggatatggtgattcacggacctttctt
ccagcagaattcatggttcctcctccgcccctagaatctcacaagtttgcgtatagactt
cctgtagggatgacgcctgaggagcttgatattattaagctcacggcgcagtttttggcg
cggtatgggaacgtgttttgggagggtttcaagaaaagtgtgagtatggatcctcagttt
gagtttattaggaatccaactgatggcaggttcactcttttcagtggacttgttcaagcg
tacggggaagttttatgtcctcaaatcttgaaagaaaagctgagaaagaaggcggccgct
gatatggagaccattcttgagaactgtttccatcgtgttcaatgggatcgttccagaagg
agcattgggagaagaaacggaaggagcatggggagaaagaaagtggcaagcgagaggaga
aggatacggatccaggatttgcacattttttag

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