Camelina sativa (false flax): 104778917
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Entry
104778917 CDS
T05044
Name
(RefSeq) oligouridylate-binding protein 1C
KO
K13201
nucleolysin TIA-1/TIAR
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104778917
03041 Spliceosome [BR:
csat03041
]
104778917
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
104778917
Spliceosome [BR:
csat03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
104778917
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_5
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
104778917
NCBI-ProteinID:
XP_010501630
UniProt:
A0ABM0YIX5
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Position
1:6121026..6124557
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AA seq
427 aa
AA seq
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MQNPRLKQQQQQQQQVLMQQQALMQQHSLYHPGVLAPPQLEPVPSGNLPPGFDPSTCRSV
YVGNIHTQVTEPLLQEIFTSTGPVESSKLIRKDKSSYGFVHYFDRRSAALAILSLNGRHL
FGQPIKVNWAYATGQREDTSSHFNIFVGDLSPEVTDATLYQSFSVFPACSDARVMWDQKT
GRSRGFGFVSFRNQQEAQTAVNEMNGKWLSSRQIRCNWATKGATSGEDKHSSDGKSVVEL
TTGSSEDGKETLNEEAPENNSQFTTVYVGNLAPEVTQLDLHRYFHALGAGVIEEVRVQRD
KGFGFVRYNTHPEAALAIQMGNSQPYLFNRQIKCSWGNKPTPPGTASNPLPPPAPAPVPG
LSAADLLAYERQLALSKMASVNALMHPQGQHPLRQAAHGMNAAGHTAAMYDGGYQNVAAA
QQLMYYQ
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgcagaatccgagactgaagcaacagcaacaacaacaacaacaagttttgatgcagcaa
caagctctgatgcagcaacactctctttaccatcctggtgttttggctcctcctcagtta
gagcctgttccaagtggaaaccttcctcctggttttgatcccagtacttgccgtagcgtg
tatgttggaaacatccatacacaggtcacagagcctctgcttcaagagatttttactagc
actggccctgttgaaagcagtaaactcataaggaaagataagtcatcatatggatttgtt
cactacttcgaccgtagatctgctgctctggctatactgtccctgaatggaaggcatctg
tttggacagcctatcaaagtcaattgggcatatgccactggtcagagggaagacacttca
agccatttcaacatttttgttggagatctcagtccagaggttactgacgctactttatat
caaagcttttctgtttttcccgcttgttcggatgcaagagttatgtgggaccagaagact
gggcgctcaagaggctttgggtttgtttccttccgcaatcaacaggaagctcaaactgcc
gttaatgagatgaatggtaagtggttaagtagcagacagatcagatgcaactgggccacg
aagggcgctacttctggtgaggataagcacagttctgatggaaaaagtgttgtagaactt
acaactggctcatcagaggatggtaaagagaccctaaatgaggaagcacctgaaaacaat
tctcagtttactactgtttatgtgggaaatcttgctccagaggtaactcagcttgatcta
caccgctacttccatgctcttggtgctggagttattgaagaggtccgtgtccaacgagac
aaaggctttggtttcgtgagatataatacgcatcccgaggctgctcttgctattcagatg
ggtaacagtcagccttacctctttaacagacagataaagtgctcatggggaaacaaacca
actccaccaggtacagcctcaaacccacttccccctcctgccccagcaccagtgcctggt
ctgtctgcagctgatctcttagcctatgaaaggcaattggcactaagcaagatggctagt
gtgaatgccctaatgcatccacagggtcaacaccctctaaggcaagcagctcatggaatg
aatgcagctggacatactgcagccatgtacgatggtggctatcagaatgttgccgccgca
caacagctcatgtactatcagtaa
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