Camelina sativa (false flax): 104791627
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Entry
104791627 CDS
T05044
Name
(RefSeq) transportin-1-like
KO
K18752
transportin-1
Organism
csat
Camelina sativa (false flax)
Pathway
csat03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104791627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104791627
03009 Ribosome biogenesis [BR:
csat03009
]
104791627
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
104791627
Ribosome biogenesis [BR:
csat03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
104791627
Pre-60S particles
104791627
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
HEAT_GCN1
CEP104-like_TOG
TPR_IMB1
HEAT_2
Arm
HEAT_GCN1_C
TOR1L1_N
HEAT_DAAF5
Tti2
Motif
Other DBs
NCBI-GeneID:
104791627
NCBI-ProteinID:
XP_019083827
UniProt:
A0ABM1QAN9
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All DBs
Position
1:complement(15354837..15360167)
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AA seq
625 aa
AA seq
DB search
MADKAHVMIELNEKVSLTASKVWPPYYDAHQLQPKDLKDSLPGLIPMLLSAMAYDESLLD
EKEDESQPDIDQAHSGDLFNVGNLRARTAKFIGILSDLYGDEILQTLMPLIEVKLSKSDD
ETWKEREAAVFALGAIAEGCCKIFYTHLLPSMQIVAILLPLLDDKFPLIRSISCWTLSQF
GTYVFKEDDDLKNSELFEKALKGLLPKLLDTSNRVQKAACLALITIEEHAGDNLVPHLSV
ILRHLMRALEMYQRQNLKFVYDGIRALADSVGIDLNEPNYLEILMPPLVSKLQQTSSSDK
DVIHLLKCFTSLSEALEVGFAPFALPVFQMSLDIIQQQQLAKVNHAFSGDEYDKRIIVSS
LELVSGLAEGLGSGIKSMVSQSNLMDLLLKCCMDETPDVRETAFALMYDLVMVFPLYLQP
RMPEFLVIASQQLSGDFTGENLGSANNACKAIGELVFQFGQEVSQIVTNVVSSLGLILQH
GEALVVRSATTLLECNTIDLTVNSAITLGILAWIRPDLVPPHMEYSMKAWCKTLATLADD
DISKEAAFSGLCEMVKANPSVGCSSVAYICLALASWEEIRNEDLQTEFTRVLNGYKSMLG
RNSWADCVSGLDPLVKERLARWYRM
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaaggcacatgtaatgatagagctcaatgaaaaagtatctcttacagcatct
aaagtttggcctccatactatgacgctcatcagctgcaaccaaaagacttaaaggattca
ttgccaggcttaattccaatgttgctttcagccatggcttacgatgaatcacttttggat
gaaaaggaggatgaatctcaaccagatatagatcaggcacatagtggtgacttgtttaac
gtgggaaatttaagagcacgcactgcaaaatttattggcattctctctgatttatatgga
gatgaaattcttcaaacactcatgccccttattgaggtaaaattatcaaaatctgatgat
gagacttggaaagaaagggaagctgctgtttttgctcttggagctattgctgaaggatgc
tgtaaaattttttacactcatttgttgccttctatgcagattgtagcaatccttcttcct
cttttagatgataagtttcctctcatacgaagcatatcgtgctggacactttctcaattt
ggcacatatgtttttaaggaagatgatgatctgaagaattctgaactatttgagaaagct
cttaagggtcttcttcccaaacttttggatacaagcaaccgggtccagaaggcggcatgt
ttagctttgataactattgaagagcatgctggggataacttagtgccacacctgagtgtc
atactacgccatctaatgcgcgctcttgaaatgtatcagaggcagaacttaaagtttgtt
tatgatggtattagagcactggcagattcagttggaatcgatctgaatgagcctaattat
cttgagattttgatgcccccactggtttcaaagttgcaacaaacttcaagttcagataaa
gatgtaattcatttgctaaaatgcttcacatccctttctgaggctttagaagtaggattc
gctccatttgctctacctgttttccagatgagcctggatattatccaacaacaacaacta
gctaaggttaaccatgctttttctggggatgaatacgacaaaagaatcattgttagttct
cttgagcttgtttctggacttgctgaaggacttggcagtgggataaaatctatggtttca
caaagtaatctaatggacttgcttctcaagtgttgcatggatgaaactcctgatgtcaga
gaaactgcttttgcccttatgtatgatcttgtaatggtatttccgctttatctacaaccc
cgcatgcctgagttcctcgtcatcgcaagccaacaactgagtggagattttactggagaa
aaccttggttctgcaaacaatgcttgtaaagcaattggagaattagtgttccagttcggt
caagaagtctcacaaatcgtgaccaatgtcgtctcttccttaggcttgattcttcaacat
ggagaggcattagttgtgaggagcgcaactacactacttgaatgcaatacgattgaccta
actgtgaacagtgcaattacccttggaatactagcatggattcgtccagacctcgttcca
ccacacatggagtactctatgaaggcttggtgcaagacattggcaacgttagctgatgat
gacatttcgaaagaagctgcatttagtgggttatgtgaaatggttaaagcgaatccatca
gtaggctgcagctcagttgcttacatatgcttagccttggcaagctgggaagaaataaga
aacgaggacctccaaactgaattcactcgagtgctgaacggctacaaaagcatgctagga
agaaactcatgggctgattgtgtatctggtttggatcctcttgttaaagagaggcttgcg
aggtggtatcggatgtga
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