Cannabis sativa (hemp): 115700926
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Entry
115700926 CDS
T08987
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
csav
Cannabis sativa (hemp)
Pathway
csav00040
Pentose and glucuronate interconversions
csav01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
115700926
Enzymes [BR:
csav01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
115700926
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GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Mt_ATP-synt_B
Motif
Other DBs
NCBI-GeneID:
115700926
NCBI-ProteinID:
XP_030484464
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Position
8:complement(9664922..9667562)
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AA seq
442 aa
AA seq
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MVNTTKFYVLFFFLTFATILVQSKIPEYDDYWKNRAEESQKYAIEAYTSNPEEVTEQLNS
HVEQALTKSSNSSRRRELRGRRNRKTGPCRATNPIDRCWRCDPNWASNRKKLADCVLGFG
RNTVGGKNGSYYIVTDPSDNNLVDPLPGTLRHAVTRKKPLWIIFARSMIIRLNEELIITS
DKTIDARGANVRIAFGAGITIQFVKNVIIHNLHIHDIVSSGGGNIRDSSDHVGFRTKSDG
DGISIFGSTNIWIDHVSMSNCQDGLIDAIMGSTAITISNCHFTHHNEVMLFGASDSYSAD
QMMQVTVAFNHFGQGLVQRMPRCRWGFFHVVNNDYTHWLMYAIGGSQHPTIISQGNRFIA
PPNLNAKEVTKREYAEGSEWKQWQWKSQGDLMMNGAFFVESGSRFNKKQFSRHDMIKYKP
GTFVTRLTRNAGTLICRYGKPC
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggttaacacaactaaattctatgtgttgttctttttcttaacttttgctacaatattg
gttcaatcaaaaatccccgagtacgacgattattggaaaaatagagctgaggaatcccag
aaatacgccattgaagcttacacttcaaatccagaggaagtaactgaacaattgaactcc
catgtcgagcaggctctaacgaagtcgtcgaacagcagcagaagaagagaattgagaggc
agaaggaacaggaagacaggtccatgcagagccacaaacccaatagacagatgttggaga
tgtgaccccaactgggcgagtaaccgtaagaagttagccgactgtgtccttggctttggc
cgcaacacagtgggtggtaagaacggttcctactacatagtcacggacccttcagacaac
aacctcgttgaccccttacccggcacactccgccatgcagtcactcggaaaaaacccctt
tggatcatcttcgctcgtagcatgattatcaggctcaacgaagagctcatcatcactagt
gataagaccatcgacgctcgaggagccaatgttcgcattgccttcggtgctggcattact
atccagttcgtcaagaacgttatcatccataatcttcacatacacgatatcgtttcaagt
ggtggtggaaacatcagggactcttcggaccacgttggttttaggacaaagagtgatggt
gatggtatctccatatttggctctacaaatatttggattgatcacgtctctatgtctaac
tgtcaagatggcctcatcgatgccatcatgggttccactgccattaccatctccaactgc
cacttcacccatcacaacgaggtgatgttgttcggtgcgagtgatagttactcggctgac
cagatgatgcaagtgacagttgctttcaatcattttggacaaggattggtgcaaagaatg
ccaaggtgcagatggggattcttccatgtggtcaacaatgactacactcactggctcatg
tacgccattggaggtagccaacaccctactatcatcagccagggaaataggttcattgct
cctcctaatttgaatgcaaaagaggtgacgaagagggagtacgcagaagggagtgaatgg
aagcaatggcaatggaaatctcagggagacctaatgatgaatggggcattctttgttgag
tcaggaagtcgtttcaataaaaaacagttctcaaggcatgatatgattaagtacaagcct
ggcacctttgtcacgagactcactcgcaatgctggcacactcatctgtcgctacggcaaa
ccatgctaa
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