Cannabis sativa (hemp): 115705463
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Entry
115705463 CDS
T08987
Name
(RefSeq) nuclear-pore anchor isoform X1
KO
K09291
nucleoprotein TPR
Organism
csav
Cannabis sativa (hemp)
Pathway
csav03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115705463
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csav03019
]
115705463
Messenger RNA biogenesis [BR:
csav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115705463
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
115705463
NCBI-ProteinID:
XP_030488658
LinkDB
All DBs
Position
1:complement(50722731..50745481)
Genome browser
AA seq
2051 aa
AA seq
DB search
MPLFLSDEEFSRLRHDVDSVAEKADSVIRDLRKELDTVRAQADASSITAEQTCSLLEQKY
LSLSSDFSQLQSHNDQLQSSLDQRLSELAQVQAQKHQLHLQAIEKDGEIERLKTDVSELH
KSKRQLLELVELKDSEISEKNANIKSYLDKIVNLTDIASEKEARVSESEAELARSQAACA
RLSQEKELLERHNAWLNDELTSKVDNLIELRRKHADLEADLSSKLADAERQLEECSTSLN
WNKERARELETKLKSLEEELCSTKDVASANEEQLSAELSTVNKLVELYKESSEEWSKKAG
DLQGVIKALETHLDQVQNDYKERLEKEVSARQQFEKEVADLKLKLEKCEAEIERSRKENE
LKLLPLSNFTTESWINSADTNDTVENDRMLVPRIPAGVSGTALAASLLRDGWSLAKMYSK
YQEAVDALRHEQMGRKESEAVLQRILYELEEKAELILDERAEHERMAEAYSMINQKLQMS
TSEQANLEKMIQELKADLRRHERDYNLAQKEIIDLQKQVTVLLKECQDIQIRCGSSGQDN
DTSIVPFGMIIDSNAENVISERLLTFKDINGLVEQNVQLRSVVRSLSEQIENKEMEFKEK
LEMELKKHTDEAATRVVAVLQRAEEQGQMIESLHTSVSMYKRLYEEEHKLHSALPLPVEA
ASEDRRPNFKLLLEGSQETTRKAQEQAAERVKRLEEELEKSRIEIASIRSEREKFALEAS
FSSERLDRFMKEFEHQRAESNGILARNVEFSQLIIDYQRKLRENSESVNAASELSRKLNM
EVSVLKHEKEMLVNAEKRALDEVRSLSERVHRLQASLDTIQCAEQVREEARAAERKRQEE
YTKQIQREWAEARKELQEERDNVRALTQEREQTIKSAMRQVEEMAKDLSNALHAAAAAET
RATLAEVKLSDLEKKIKSSDVKDLDIDGANGSSSIFGSETITDLRAAKEEIEKLKEEAHV
TKDHMLQYKSIAQVNEDALKQMECAHENFKVEAEKLKRSLEAELLSLREKVSELENECSL
KSEEVASAAAGKEEDLSSASAEIRSLKEENSAKASQIMTMEIQISALKEDLDKEHQRWRA
CQDNYQRQVILQSETIQELNKTSQALGLLQEEASEMRRLVDAQKSENNDLKSKWEAEKAA
ALELKNDFEKKYNELNEQNKILHSRLEALHIQSAEKDRSSSGLSSGTAGPDALSDADLQK
VVHYLRRTKEIAETEISLLKQEKLRLQSQLESALTAAETAQSSLHSERASSRTLLFSEEE
IKSLQLQVREMNLLRESNVQLREENKHNFEECQKLREVAQKANVEIENMEKLLKESQIQV
EACNKEILIQKLEKEQLEKRVAELLERCKNIDVEEYDRLKDEVQQMQEKLKEKDSQLEEN
KRLLSEKQGAVSLLEQDLCNCRSELSEREKRINDSLQAEASLKSEVEKQRKMISQLKRRL
EILSKEKEELSKENQAITRQLEELKQAKKSGGDTSGDQAMKEEKDTRIQILEKHLERQRE
ELKAEKARRLKNEKAVMDSYKNIEQEKAKFLDELEKHKQYSKRLSDELDKYKHGKESLPE
GTSLAQQLPGSDLEERSSAYVSAVENYEKASRSVSSERGAHAVPSETAVADSTAVATTAS
AGLGTSLPAKSTEESERRSTALKSVESRKMGRKLVRPRLLKPEEPQGDTEMSETEVANKP
VTSTETETQGNSSSVPVIQTNLRKRLSSSSDFGSREESTTQGESGSDVAVHLLKKPKGSE
PLQERAEGQVSAVLESLETLPAIEEVSDVGDLPQAANEEAITDLEKEEEVAGEKVDEPKE
PQIGETNQVDSQIDNSILEENLDGAAGKEMVSDDGALDNADLENQSSMMEIGGDREEGEL
LPDAAELEGSGDAVGSAELVEAQAQPEPAATPVASPARVDDEIQDASELTSQDIPSDEKN
EEADVPEETAEVSDKSNDGTDQAPVEGDQVAEAASVVSESTVTVPTSEASVSKQESPSVA
TESEEVKQVSPLSGGSTTINLSERARQRAMLRQAGAGVVSPSPSRGRGRGVPRGRGVRGR
RGRGPTPSEQP
NT seq
6156 nt
NT seq
+upstream
nt +downstream
nt
atgccgcttttcctctccgacgaggagttctctcgtctccgccatgacgtcgattcggtg
gcggaaaaggctgactccgtcatccgtgacctacggaaagagctcgatactgtgagggct
caggctgatgcctcctccattaccgcagagcagacctgttctctcctcgagcagaaatac
ctatctctctcctccgacttctctcagcttcagtcccacaatgaccagctacaatcctct
ctcgaccaacgcctctctgaactcgcccaagtccaggcccagaagcaccagctccacttg
caagccattgaaaaagatggggaaattgagaggctaaagactgatgtttcagagctgcat
aagtctaaaaggcagttactcgagttggtggaactaaaagattcagagattagtgagaag
aacgccaacatcaagagctatcttgataagattgttaatttgactgacattgcctctgaa
aaggaggctcgagtaagcgaaagcgaagctgaattagcacgatcccaggcggcgtgtgcc
cgtttgtctcaggagaaagagcttcttgaaaggcataatgcatggcttaatgatgagttg
acgtccaaagtagacaatcttattgagttgcggagaaagcatgctgatcttgaggcagat
ctatcttcaaagcttgcagatgctgagagacaacttgaagagtgttctacctctctaaat
tggaataaggaaagggcaagagagcttgaaacaaagctaaaatcattggaggaggaatta
tgctcaactaaagatgttgcttcagcaaacgaggaacaactatctgctgaactctcaaca
gttaataagcttgtagagctgtataaagaaagttccgaggaatggtctaaaaaggctgga
gatcttcagggtgttataaaagctttggagacacatcttgatcaagttcaaaacgattac
aaagaaagactagaaaaggaagtatctgcaagacaacaatttgaaaaggaagttgcagat
ttgaaactgaaacttgaaaagtgtgaagctgaaattgaaagaagtaggaaagaaaatgag
ttgaagcttcttcctctcagtaattttactactgaatcgtggattaattcagctgacacg
aatgacacggttgagaatgaccgaatgcttgttcctaggatcccagctggtgtttcagga
actgcattagctgcttcacttctgcgtgatggttggagtctggcaaaaatgtattcaaag
taccaagaagctgttgatgctctgcgacatgagcagatgggaagaaaggaatctgaggca
gtactgcaacggatcctgtatgaacttgaggagaaagctgagctaattttggatgaaagg
gcggaacatgagagaatggctgaggcatactctatgatcaatcagaagctgcaaatgtca
acttctgaacaggcaaacttggagaaaatgatccaggagttgaaggctgatctaaggagg
catgaacgtgactataatcttgctcaaaaggagattattgacctccaaaaacaggttaca
gttcttcttaaggaatgccaggatatacaaattcgttgtggatcttctggtcaagataac
gacacttctattgttccgtttgggatgattatagattcaaatgctgaaaatgtcatctct
gaacgtcttttgaccttcaaggacataaatggactggttgagcaaaatgttcagctcagg
agtgttgttcgcagtctttctgaacaaattgaaaataaggagatggaattcaaggaaaaa
cttgaaatggaactcaagaaacatactgatgaagctgcaactagagttgtggcagtacta
cagagagctgaagaacaaggacagatgattgaatctcttcacacatctgtttcaatgtac
aaaaggttatatgaagaggaacacaaactccattcggctcttcctcttcctgtagaggct
gcttcagaagacagaagacccaacttcaagttgcttcttgaaggttctcaggaaacaaca
agaaaggcccaagaacaggctgcggaacgagtgaaacgtcttgaagaggagctggaaaag
tctaggattgagattgcatccatacgctcagagcgtgaaaagtttgctttggaagcgagt
ttttcaagcgagagactagaccgattcatgaaagaatttgagcatcagagagctgaaagt
aatggcattctagcaaggaatgtggaattttcacagttgataattgactatcaacgaaag
ttgcgtgaaaattctgaatctgtgaatgctgcgtcagagctgtcgaggaagttgaacatg
gaggtttctgttctaaagcatgaaaaggaaatgttagttaatgcagagaagagggcttta
gatgaagttcgtagtttgtcagagagggttcatcgcctgcaggctagtttggatactatt
caatgtgcagagcaagttcgagaggaggcaagagctgcagagaggaaaagacaagaagag
tatacaaaacaaattcagagagaatgggctgaggcgaggaaagagctacaagaagaacgg
gataatgttcgagctttaacccaagaacgtgaacagaccataaaaagtgccatgagacaa
gttgaggaaatggcaaaggacctaagtaatgccttgcatgctgctgcagctgctgagact
agagcgaccttagcagaggtgaaattgtctgatctggagaaaaaaattaaatcttcagat
gttaaggatcttgatattgatggtgcaaatggatcttcctccatttttgggagtgagacc
attacggatttgcgggcagcaaaggaggagattgaaaaattgaaagaggaagcacatgtt
accaaggatcatatgctgcagtataagagtatagctcaagtgaatgaagatgcacttaaa
cagatggaatgtgcccatgaaaactttaaagttgaggctgaaaaactaaagagatcactg
gaagctgaactactttctcttagagagaaagtttccgaacttgaaaatgaatgtagcttg
aagtctgaagaagtggcttctgcagctgcagggaaggaggaagatctttcttctgcttca
gcagaaatcagaagtctaaaagaggaaaattcagctaaagcgtcacaaattatgactatg
gagatccaaatttctgctttgaaagaagatttggataaagaacaccagcgatggcgtgca
tgtcaggataattatcaaagacaggttatcctccagtcagaaactatacaagaattgaat
aaaacttcacaggctttgggtttgctgcaagaggaagcatctgagatgcgtagattggtt
gatgcacagaaaagtgaaaataatgacctaaagtcaaagtgggaagctgagaaggcagca
gctctggagttgaagaatgattttgaaaagaagtacaatgaactcaatgaacagaacaaa
atactgcatagtagacttgaggctttacacattcaatcagccgagaaagatcgttcttca
tctggattgtctagtggaactgctggtccagatgctctcagtgatgctgatttacaaaaa
gtcgtacattatctgcgaagaaccaaagaaattgcagagactgagatttctttgttaaag
caagaaaaattgcgacttcaatcacaacttgagagtgcattgacggctgcagaaacagcc
caatcatcacttcattctgaacgtgcaagttcaagaacattattattttcggaggaggaa
attaaatcattacaactacaggtgagagaaatgaacttgcttcgtgaaagcaatgtgcaa
ctcagagaagaaaacaagcataattttgaggagtgccagaaattgcgtgaagtggctcaa
aaagctaatgtcgagattgagaacatggaaaaactcttaaaggagagtcagattcaggtg
gaagcctgtaataaagaaatactcatccagaagttagagaaggaacaactggaaaagagg
gtggcggagttactcgaaaggtgtaaaaacattgacgtggaagagtatgatcgtttaaaa
gacgaagttcagcagatgcaggaaaaattgaaagagaaggattctcaattagaggaaaac
aaaaggcttctttctgaaaaacagggagctgtgtcactgttggaacaagacctctgtaat
tgcagatcagaactatctgaaagggagaaaaggataaatgatagtttacaggctgaggca
agtctgaaatcagaagtggaaaagcagaggaagatgatttctcagctaaagaggagactt
gagattctgtcaaaggagaaggaggaactgagcaaagagaatcaagctattactaggcaa
ttggaggagcttaaacaagcaaaaaaatctggaggggatacatctggtgatcaggccatg
aaggaggagaaagacactagaattcagattctggaaaagcacctagagaggcagagagag
gaattgaaagcagaaaaagcaaggcgactgaaaaatgagaaggcagtgatggattcttat
aaaaacatcgagcaggagaaagcaaagtttcttgatgaacttgagaagcacaagcagtat
tcgaagcgtctctcagatgaactggacaagtataagcatggaaaagaaagtctcccagag
ggcacatcactggctcagcaacttcctggatctgatttggaagaacgtagtagtgcctat
gtgtcagccgtagaaaattacgaaaaagcatcacgttcagtttccagtgagcgtggagct
catgccgtcccttcagaaactgcagttgctgattctactgcagtggctacaactgcttct
gcaggtctgggaacgagtttaccagccaaatcaactgaagaaagtgaaagaagatctact
gcacttaaatctgttgaatctcgtaaaatgggccggaaattggttaggccacgccttctc
aaaccagaagaaccccaaggtgatactgagatgtccgagacagaagtagctaataaacct
gtaacatccacagaaacagaaactcaaggcaatagttcttctgtacctgtgatacaaact
aaccttcgaaaacgtctgtcttcatcttctgattttggttctcgtgaagaatcaactacc
caaggggaaagtggctctgatgtggctgtacatttactgaagaagccaaaagggtcagaa
cctctacaagagagagccgaagggcaggtttctgctgttttggaaagtcttgaaacactt
ccagccatcgaggaggtctctgatgttggggatttgcctcaagctgcaaatgaggaagcc
attactgatcttgagaaagaagaggaagttgcaggggagaaggttgatgagccaaaagaa
ccacagataggagagacaaaccaagttgattctcaaattgacaacagtatcttggaagag
aatttagatggggcagcagggaaagagatggtgtctgatgatggagcccttgataatgct
gatcttgagaaccaatcatctatgatggaaattggaggtgacagagaagagggtgagctg
ttgcctgatgctgcagagctagagggttctggtgatgcagtggggagtgctgaattagtg
gaagcccaggctcaacctgagcctgctgcaacgccagtcgcttcacctgctagggttgat
gatgagattcaagatgctagtgagcttacttctcaagacattccgagtgatgagaagaat
gaggaagccgatgtacctgaagaaactgctgaagtttctgataaatcaaatgatggtacc
gaccaagcaccagtggagggggatcaggttgcagaagctgcttcagttgtctccgaaagt
actgtaacagtacctacttcagaagcttctgtttcaaaacaggaaagtcccagtgttgct
acagaatctgaagaggtaaaacaggtttcgccgttgagtggtggatccactaccataaat
ttgtcagaacgagccaggcagagagctatgctaagacaagctggagctggagtagtttct
ccttcacccagcagaggccgtggtagaggcgtgccacggggtcgaggggtacgtggtaga
cgaggacgtggacccacacctagtgaacaaccttga
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integrated database retrieval system