Cannabis sativa (hemp): 115715630
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Entry
115715630 CDS
T08987
Name
(RefSeq) transcription factor SPEECHLESS isoform X1
KO
K20558
transcription factor SPEECHLESS
Organism
csav
Cannabis sativa (hemp)
Pathway
csav04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
115715630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csav03000
]
115715630
Transcription factors [BR:
csav03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
115715630
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GFIT
Motif
Pfam:
HLH
bHLH-TF_ACT-like_plant
PPP4R2
Motif
Other DBs
NCBI-GeneID:
115715630
NCBI-ProteinID:
XP_030500148
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Position
5:complement(5754868..5835471)
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AA seq
359 aa
AA seq
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MMMNTMKDATLSATSDYFFDDDNEYFGSNDHINNLPSGDDLFSILDSLEPDFPPLEECTK
LQSKQNQTKSSTTKKRALVSQDSLSSETELDLLPNSKKSKVSMTAAAAAATEDETTEGQG
NKMSHIAIERNRRKQMNENLSVLRSLMPCFYVKRGDQASIIGGVVDYITELQQVLQSLEA
KKQRKFYSEVLSPRLVSSSPRGSPMILSPKPPLSPRLMSLPNSPRTPQSISSPYIPPRLQ
LQQQQQTSYLSNEPSPTASSASSNFNTNDLFANSKSALADVEVKFSGSNVLLKTVSPKIP
GQAVKIIAALEDLSLQILKININTLDDTMLNYSFTIKIGIECQLSAEELAHQIQQTFSL
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgaatactatgaaagatgctactttgtctgccacatctgattactttttcgac
gacgataatgaatacttcggttccaatgatcatatcaacaacttaccttctggagacgat
ctttttagtatcctcgacagcttagagcccgattttcctccattggaagaatgtacaaag
ctccaaagcaaacaaaatcaaacgaaatcatctacaaccaaaaaaagagccctagtttct
caagactcattatcttcagaaaccgaacttgaccttttgccaaacagcaaaaagtcaaaa
gtttccatgaccgcagccgctgcagctgcgactgaggatgaaaccacagaaggacaaggg
aataagatgtctcacatagcaattgagagaaaccgcagaaaacaaatgaatgagaatttg
tctgttttgcgttctctcatgccttgcttctacgtcaagcgaggagaccaagcatcaatt
attggtggagtagtggactacatcaccgagttgcaacaagtgttacagtcattagaggcc
aaaaaacaaaggaaattttacagtgaagtgttgagccctagactggtttcaagtagtcca
agaggttcaccaatgattctaagcccaaaaccaccactaagccctcgactaatgagctta
ccaaatagcccaagaacacctcagtcaataagtagcccatacataccaccaaggctccaa
cttcaacaacaacaacaaacttcctatcttagtaatgaaccctctccaactgcatcctct
gcttcatccaattttaatactaatgatctttttgccaattccaaatctgcccttgctgac
gtggaggtcaaattttctggatcgaatgttcttctaaagactgtatctcctaagattcca
ggacaagcagtgaagataattgctgctcttgaagacctttcactacaaattcttaaaatc
aatatcaacaccctcgatgacaccatgcttaattattccttcaccattaagattggaatt
gaatgtcaactgagtgcggaggaactggctcaccaaatccagcaaacattctccttataa
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