Cannabis sativa (hemp): 115722240
Help
Entry
115722240 CDS
T08987
Name
(RefSeq) protein CHROMATIN REMODELING 19
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csav03036
]
115722240
Chromosome and associated proteins [BR:
csav03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
115722240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
115722240
NCBI-ProteinID:
XP_030507255
LinkDB
All DBs
Position
9:55466738..55475793
Genome browser
AA seq
740 aa
AA seq
DB search
MKRDYQEISDDEWENHSFKPSRVLGKKPQNPSSTPPLPPPPIESFSFRSSSKLEVSNQSS
DDCVEVGEDLEDDDVEVSHVRPVNRGRRFVIEDDESDEELPEVFEIKSTTEEEDDLELED
EVADEDDVVGKALQKCAKISAELRRELYGSSVPACDRYAEVESSSVRIVTQDDVDAACTS
EDSNFQPILKPYQLVGVNFLLLLHRKGIGGAILADEMGLGKTIQAITYLTLLNHLHDDPG
PHLIVCPASVLENWERELKKWCPSFSVLQYHGAVRSAYAKQLNSLSKAGLPPPFNVLLVC
YSLFERHSAQQKDDRKILKRWQWSCVLMDEAHALKDKGSYRWKNLMGVARNANQRLMLTG
TPLQNDLHELWSLLEFMLPDLFCTEDVDLKKLLNAEDRDLIGRMKSILGPFILRRLKSDV
MQQLVPKIQKVEYVAMRKQQDEAYKEAIEEYRAASRARLEKSSENQKNSIFGVLPRRQIS
NYFVQFRKIANHPLLVRRIYSDEDVVRFARKLHPMGAFGFECTVDKVIAELKSYNDFSIH
RLLLYHSITDSKGILDDKHVMRSGKCQALAELLPSLKEAGHRVLIFSQWTSMLDILEWTL
DVIGLSYRRLDGSTQVSDRQTIVDTFNNDTSIFACLLSTRAGGQGLNLTGADTVVIHDMD
FNPQIDRQAEDRCHRIGQTKPVTIYRLVTKNTVDENIYEIAKRKLVLDAAVLESGLEMDE
EGGETSEKTMGEILSSLLLG
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcgattatcaagaaatctcagacgacgagtgggaaaaccactcctttaaaccc
tcccgagttcttggcaagaagcctcaaaacccttcttctacaccaccacttcctcctcct
ccgattgagtctttctcctttaggtcttcctcgaagctcgaagtctcaaatcagagcagt
gacgattgcgttgaggtcggagaggatttggaggacgacgatgttgaggtctcgcatgtt
cggccagtgaatcgtggccgtagatttgtgattgaggatgacgagagtgatgaggagtta
cccgaagtgttcgagatcaagtcaacgactgaagaggaggatgacttagagttagaggac
gaggttgcagatgaggatgatgtggtcgggaaggctttgcagaagtgcgctaaaatctcg
gccgagctgagaagagagctgtacggttcttccgttccggcctgtgatcgatatgccgaa
gtggaatcttcttccgttagaattgttacacaggatgatgtagatgcagcatgtacatct
gaggactcaaattttcagcccattctcaagccatatcagttggttggggtgaactttctt
cttctgctgcatcggaagggtatcgggggagccatattggctgatgagatgggccttggg
aaaaccattcaggctataacgtatttgaccttgttaaaccacctacacgatgatcctggt
ccacatttgattgtttgtcctgcttcagttttggaaaattgggaaagagaacttaaaaaa
tggtgcccatcgttttctgtcctccagtatcatggagctgttcgatcagcatatgcaaag
cagttgaactcattatccaaagctggattgccacctccatttaatgttcttcttgtgtgc
tattcgctttttgagagacacagtgcacagcagaaagatgatcgtaaaattttgaaacgt
tggcaatggagctgtgtgctcatggatgaggcccatgctttaaaggacaaaggcagctat
aggtggaaaaatttaatgggtgttgctcgaaatgcaaatcagcgtttaatgctgacaggg
acaccgctacaaaatgatttacatgaattgtggtctctgttggagtttatgctgcctgat
cttttctgtactgaggatgttgacttgaaaaaattgctgaatgctgaagatagagatttg
attggccgaatgaagtccattttgggaccattcatattgaggcgattaaaatctgatgtt
atgcagcaacttgttccaaaaatacagaaggttgaatatgtggcaatgagaaagcaacaa
gatgaggcttacaaagaagccattgaggagtatcgtgcagcttctcgggctcgtttggaa
aaaagttcagagaatcaaaagaacagtatttttggagttcttcccagaaggcaaatatcc
aactactttgttcagttccgtaagattgcaaatcaccctttattggtgaggcgtatttac
agtgatgaagatgttgttcgttttgctagaaagttacacccgatgggtgcgtttggcttt
gaatgtacagtagacaaagtaattgcagaactcaaaagttataacgacttctctattcac
cggcttttactttatcatagtattactgattcgaagggtatccttgatgacaaacatgtg
atgcgttcaggaaaatgtcaggcactggccgaacttcttccttcacttaaagaagctggg
catagagtcctgatctttagccagtggacatcaatgcttgatatcttggagtggactctg
gatgtcattgggctttcgtatagacgtcttgatggaagtactcaggtatcggatagacag
accatagttgacacattcaataatgacacttctatatttgcatgcttgctgtccacaaga
gccggagggcagggtttgaacttgactggtgctgatactgttgttattcacgacatggat
ttcaacccacaaattgatcgacaagcagaagatcgttgccatcgtattggccaaacgaaa
cccgtcacaatatacaggctggtaaccaagaatacagttgatgaaaatatttatgagatt
gcaaaacgcaaattagttctagatgctgctgttcttgaatcgggcttggaaatggatgag
gaaggtggagaaacatctgagaagacaatgggagagatattatcctcacttttacttggt
taa
DBGET
integrated database retrieval system
