Candidatus Chlamydia sanziniae: Cs308_0694
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Entry
Cs308_0694 CDS
T10171
Name
(GenBank) DNA-directed RNA polymerase beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
csaz Candidatus Chlamydia sanziniae
Pathway
csaz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
csaz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Cs308_0694
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csaz03021
]
Cs308_0694
03400 DNA repair and recombination proteins [BR:
csaz03400
]
Cs308_0694
Enzymes [BR:
csaz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Cs308_0694
Transcription machinery [BR:
csaz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Cs308_0694
DNA repair and recombination proteins [BR:
csaz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Cs308_0694
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
ANH78864
UniProt:
A0A1A9HXU7
LinkDB
All DBs
Position
772449..776207
Genome browser
AA seq
1252 aa
AA seq
DB search
MFKCPERVSVKKKEDILDLPNLIEIQIKSYKQFLQIGKLAEERENIGLEEVFREIFPIKS
YNEATILEYLSYNLGVPKYSPEECIRRGITYSVTLKVCFRLIDETGIKEEEVYMGTIPIM
TDKGTFIINGAERVVVSQVHRSPGINFEQEKHSKGNILFSFRIIPYRGSWLEAIFDINDL
IYIHIDRKKRRRKILAMTFIRALGYSSDADIIEEFFKIEENVLKSEKDFALLVGRVLADN
VIDETSSLVYGKAGEKLSTAMLKRMLDAGITAVKIAVDADENHPIIKMLAKDPTDSYEAA
LKDFYRRLRPGEPATLANARSTIMRLFFDPKRYNLGRVGRYKLNRKLGFAMDDEALSQVT
LRKEDVIGALKYLIRLKMGDEKAGVDDIDHLANRRVRSVGELIQNQCRSGLARMEKIVRE
RMNLFDFSSDTLTPGKIVSAKGLASVLKDFFGRSQLSQFMDQTNPVAELTHKRRLSALGP
GGLNRERAGFEVRDVHASHYGRICPIETPEGPNIGLITSLSAFAKINEFGFIETPYRIVR
DGIVTDEIEYMTADVEEECVIAQASASLDEYNMFTEPVCWVRHSGEAYEAPTNTVTHMDV
SPKQLVSIVTGLIPFLEHDDANRALMGSNMQRQAVPLLKTEAPIVGTGLECRAAKDSGAI
VVAEEDGIVDFVDGYNVIVSAKHNPTIKRIYPLKKFLRSNSGTCINQKPLCSVGDVIIKG
DVIADGPATDSGELALGKNVLVAFMPWYGYNFEDAIIISEKLIRKDAYTSIYIEEFELTA
RDTKLGKEEITRDIPNVSDEVLANLGEDGIIRIGAEVKPGDVLVGKITPKSETELAPEER
LLRAIFGEKAADVKDASLTVPPGTEGVVMDVKVFSRKDRLSKSDDELVEEAVYLKDLQKG
YKNQIAVLKTEYREKLGALLLNEKAPASIIHRRTADILVHEGVVFDQDTIEILEQEALVD
LLMPPCEMYDVLKGLLSGYETTLQRLEVNYRTEVEHIREGDADLDHGVIRQVKVYVASKR
KLQVGDKMAGRHGNKGVVSKIVPEADMPYLANGETVQMILNPLGVPSRMNLGQVLETHLG
YAAKTAGIYVKTPVFEGFPENRIWDMMIEQGLPEDGKSFLYDGKTGERFDNKVVIGYIYM
LKLSHLIADKIHARSIGPYSLVTQQPLGGKAQMGGQRFGEMEVWALEAYGVAHMLQEILT
VKSDDVSGRTRIYESIVKGENLLRSGTPESFNVLIKEMQGLGLDVRPMVVDA
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaatgccctgaacgggtcagtgtcaaaaaaaaggaagatatcctagaccttcca
aatcttatcgaaattcaaattaagtcttataagcagtttcttcagattggcaagttagca
gaagaaagagaaaatattggtttagaagaagttttcagagaaatttttcctattaaatct
tacaatgaagccacgattctcgagtatctttcttataatttaggtgtgcctaaatattct
ccagaagaatgtattcggaggggaattacttatagtgtgactttaaaagtctgcttccga
ttaatcgatgaaacgggcattaaagaagaagaagtttatatgggaaccattcccatcatg
actgataaaggaacttttattattaacggcgcagaacgcgttgttgtttcacaggttcat
cgttccccaggcattaactttgaacaagaaaaacattccaaggggaatattcttttttca
tttagaatcattccttatcgagggagttggctcgaggccatttttgatatcaatgactta
atttatattcatattgataggaaaaaacgtcgtcgtaaaattttggcaatgaccttcatt
cgtgctttaggatattcctcagacgctgacatcattgaagaattttttaaaatagaagag
aacgttcttaaaagtgaaaaagattttgctttgcttgtgggaagggttttggctgataac
gtcattgatgagacctcttccttagtttacggtaaggctggagaaaagctcagtacagct
atgttaaaacgtatgttagatgctgggattactgcagtaaaaattgctgttgatgctgat
gaaaatcaccctattattaaaatgctagctaaagatcctaccgattcttatgaagccgcg
ttgaaagatttttatcgtcgattacgtccaggagaacctgcaactctagcaaatgcacga
tctacaattatgagattattctttgatcctaagcgctataacttgggacgtgtaggtcgt
tataagcttaatcgtaagttaggctttgctatggatgatgaagctctatctcaagttacc
ttgagaaaagaagatgtgattggcgctttaaaatacctcattcgcttaaaaatgggagat
gaaaaagctggtgtagatgacattgaccatcttgcaaatcggcgggtccgttctgttgga
gaactaattcagaatcaatgccgttctggtcttgcaagaatggagaaaattgttcgggaa
agaatgaatttatttgatttttcttcagataccttaacacccggaaaaattgtttctgct
aaaggtcttgcaagtgtattgaaagatttctttgggcgttcgcaattgtcacaattcatg
gaccaaaccaatcctgtggctgagctgactcataaacgacgtctttctgctttaggtcct
ggggggttaaacagggaacgtgcagggtttgaagttcgagatgtccatgccagtcactat
ggacgtatctgtcctattgaaacgccggaaggaccgaatattggtttaattacttctctg
tcggcttttgctaaaattaatgagtttggatttattgaaacgccctaccgtattgtcaga
gatggtattgtaacagatgaaatcgagtatatgacagccgatgtggaagaagaatgtgtg
attgctcaagcttctgcaagtttagatgaatacaatatgtttactgaacctgtatgttgg
gtgcgtcacagtggtgaagcttacgaagcgcctacgaacacagtaacacatatggacgtt
tctcccaaacagcttgtctctattgtaacaggcttgattcctttcctagagcatgacgat
gctaaccgtgctttaatgggatccaacatgcaacgtcaagcagtgcctttacttaaaaca
gaagctcctattgtaggtacaggactagagtgtcgcgctgccaaagattctggagcgatt
gttgttgcagaagaagatggtatagtagatttcgtcgacggttataatgttattgtttct
gctaaacataatccaacgattaagcgtatatatcctttaaaaaaattcttaagatcaaat
tctggtacgtgtattaatcaaaagcctttgtgctcagtaggtgatgtaataataaaaggc
gacgtgattgccgatggacctgcgacagacagtggagagttggccttgggtaaaaatgtc
cttgttgcctttatgccttggtatggatataactttgaagacgctatcattatatccgaa
aaactaattcgaaaggatgcgtatacctcaatttatatcgaagaatttgaactaaccgca
cgggatacaaaattagggaaagaggaaattactcgtgatattcccaacgtatctgatgag
gtattagctaatcttggagaagacgggattattcgtattggtgctgaagtaaaacctgga
gatgttcttgtcggtaaaattacaccgaaatcagaaacagaattagctcctgaagagcgc
ttgctgcgtgctatctttggagagaaagccgccgatgttaaagatgcctctttaacagtt
cctcctggtacggaaggtgtagttatggatgtgaaggtctttagtagaaaagaccgcttg
tctaaaagtgatgatgagcttgtagaggaagctgtttaccttaaagatctccaaaaggga
tataaaaaccaaattgccgtattaaaaacggaatatcgtgaaaaattaggagctctttta
ctgaatgaaaaggctccagcttctattattcatcgtcgtacggctgatatcctagtccat
gaaggagttgtttttgaccaagatactatagaaattcttgagcaagaagctttagtcgat
cttctcatgcctccttgtgaaatgtatgatgtattgaaaggattattgtcaggttatgaa
actactctgcaacgtttagaagtaaactatagaactgaagttgaacatattcgagaaggc
gatgcagatttagatcatggtgtaattcgccaagtaaaagtttatgttgcttctaagaga
aaacttcaagtcggagataaaatggcagggcgtcatggaaataaaggcgtcgtatccaag
attgttcctgaagcggacatgccttatcttgccaacggtgaaaccgtacagatgattctt
aatcctctaggtgtgccttcaaggatgaacctaggacaagtattggaaacacatcttggt
tatgctgcaaaaactgcaggcatttacgttaaaactcctgtatttgaaggattcccggaa
aatcgtatttgggacatgatgatcgagcaaggattgccagaggatggcaagtccttcctt
tatgacggtaaaacgggtgagcgatttgataataaggtcgttattggttacatttatatg
ctaaaactcagtcacttaattgctgataaaattcacgcaagatctattggaccctactcc
ttagttacacagcagcctcttggaggtaaagctcaaatgggtggacaaaggtttggagag
atggaggtttgggctctagaggcttatggtgtggcccatatgcttcaggaaattcttaca
gtaaaatctgatgatgtctctggacggacgagaatctatgagtcgattgttaaaggagaa
aatcttttaagatcaggaactcctgaatcttttaatgtcttaattaaggagatgcaaggt
ttaggacttgatgttcgtcctatggtagtagacgcttaa
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