Chryseobacterium scophthalmum: ACLB9Y_06450
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Entry
ACLB9Y_06450 CDS
T11109
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
csco Chryseobacterium scophthalmum
Pathway
csco02024
Quorum sensing
csco03060
Protein export
csco03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
csco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
ACLB9Y_06450 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
ACLB9Y_06450 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ACLB9Y_06450 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
csco02044
]
ACLB9Y_06450 (ffh)
Enzymes [BR:
csco01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
ACLB9Y_06450 (ffh)
Secretion system [BR:
csco02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
ACLB9Y_06450 (ffh)
Eukaryotic Sec-SRP protein
ACLB9Y_06450 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
SRPRB
CLP1_P
nSTAND3
AAA_22
KAP_NTPase
cobW
CbiA
APS_kinase
ResIII
AAA_18
MMR_HSR1
ATP_bind_1
AAA_19
AAA_16
AAA_33
NACHT
6PF2K
AAA_24
SLFN-g3_helicase
NPHP3_N
ATPase
AAA_14
RRM_Nup35
TsaE
DO-GTPase1
KTI12
Motif
Other DBs
NCBI-ProteinID:
XMO03267
LinkDB
All DBs
Position
complement(1446068..1447429)
Genome browser
AA seq
453 aa
AA seq
DB search
MFNSLQDKLDKALHNISGRGKITEINVAETVKEIRRALVDADVNYKVAKDLTKRVQDKAL
GQNVLTSLTPGQLMTKIVHDELVDLMGGSQEGINLSGKPSVILIAGLQGSGKTTFSGKLA
NYLKTKRTKKPLLVACDVYRPAAIDQLKVLGGQIGVPVFTEEGSVDPASIAQNAIIFAKS
NGHDVVIVDTAGRLAIDEQMMKEIKTVHSTIQPNETLFVVDSMTGQDAVNTAKAFNDTLN
FDGVVLTKLDGDTRGGAALTIRSVVEKPIKFISTGEKMEALDLFYPERMADRILGMGDVV
SLVERAQEQFDEEEAKKLHKKIAKNEFGFDDFLKQINQIKKMGNMKDLMGMIPGVGKAIK
DVEISDDAFKHIEAIIHSMTPDERRRPSIINTQRKNRIAKGAGRKIEDVNALMKQFDQMG
KMMKMMQGPQGKQMMQMMSKMPNMPGMGGMFGK
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatagtttacaggataaattagacaaagcccttcataatatttccggacgtgga
aaaatcaccgagattaacgttgcggaaaccgtaaaagaaattcgtagagcgttggtagat
gccgatgttaactataaagttgctaaagatcttaccaaaagagttcaggataaagcttta
ggacaaaacgttttgacttcgcttactccgggacaattaatgacgaaaattgttcacgac
gagttggtagacttgatgggaggttctcaggaaggaatcaatctttcagggaaaccatct
gtaattttaattgcaggtcttcaaggttcgggtaaaactactttttccgggaagcttgct
aattatttaaaaactaaaagaaccaaaaagcctttattggttgcgtgtgacgtttatcgt
cctgctgcaattgatcagttgaaagttcttggtggacagattggtgttcctgttttcaca
gaagaaggttctgtagatcctgcaagtattgctcagaatgctattatttttgctaaatct
aacggtcatgatgttgtaatcgtcgatacagcaggtcgtcttgcaattgatgagcagatg
atgaaggaaatcaaaaccgttcattctacgattcaacccaacgaaactcttttcgtagta
gattcaatgacaggtcaggatgccgtgaatactgcaaaagccttcaacgatactttgaat
tttgacggagttgttttaacgaagttagacggtgatactcgtggtggagctgctttaacg
attcgttcggtagttgaaaagccaattaaattcatttctacaggtgagaaaatggaagct
ttagatcttttctacccagaaaggatggcagacagaatcttaggaatgggagacgttgtt
tccttagtagaaagagctcaggagcagtttgacgaagaggaagcaaaaaaacttcataaa
aaaatcgctaaaaacgaatttggttttgatgatttcttaaagcagattaatcagatcaaa
aaaatgggtaatatgaaagacttgatgggaatgattccgggagttggaaaagccattaaa
gacgttgaaattagtgatgatgcattcaaacatatcgaagcgattattcattctatgact
ccggatgagagaagaagaccttctattatcaatacccagagaaaaaacagaattgcgaaa
ggtgcaggaagaaaaattgaagacgtaaatgctttgatgaaacagtttgaccaaatggga
aaaatgatgaaaatgatgcagggtcctcaaggaaaacaaatgatgcagatgatgagcaag
atgccaaatatgccgggaatgggcggaatgtttggaaaataa
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