Cynoglossus semilaevis (tongue sole): 103376952
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Entry
103376952 CDS
T04866
Symbol
mnat1
Name
(RefSeq) CDK-activating kinase assembly factor MAT1
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem03022
Basal transcription factors
csem03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103376952 (mnat1)
09124 Replication and repair
03420 Nucleotide excision repair
103376952 (mnat1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csem03021
]
103376952 (mnat1)
03400 DNA repair and recombination proteins [BR:
csem03400
]
103376952 (mnat1)
Transcription machinery [BR:
csem03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
103376952 (mnat1)
DNA repair and recombination proteins [BR:
csem03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
103376952 (mnat1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-RING_5
zf-RING_UBOX
zf-C3HC4
TRAF3_RING
zf-UDP
Xol-1_N
zf-RING_2
zf-P11
TRAF6_Z2
Motif
Other DBs
NCBI-GeneID:
103376952
NCBI-ProteinID:
XP_008305750
UniProt:
A0A3P8UGD7
LinkDB
All DBs
Position
1:6923944..6984129
Genome browser
AA seq
308 aa
AA seq
DB search
MDDQGCPRCKTTKYRNPSLKLMVNVCGHTLCENCVEMLFVRGSGNCVQCDTPLRKSNFRV
QLFEDPSVDKEVEIRKKVLKIYNKREFDFPSLREYNDYLEQVEDIVYNMTNNVDVENTKL
RMDQYQRENRDLIQKNKATLTREQEELEELLLLEKQGNEQRRLEVLQEEQRQLQARRKNK
QALLDELEKSQVPATILLAQHKARAAELEVEIEHQKQSVKPATLFSSGIQRQTVSLLPPP
KIEEVLYKYKALHIETYGPLVPELEQLGRIGYLNHVRAAMPQDTAGGYTSALACHRAIQD
AFSGLFPS
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggacgaccagggctgtccgagatgtaaaacaacgaaatacaggaacccgtcactgaag
ctgatggtgaacgtgtgcggccacacgctatgtgagaactgtgtggagatgctcttcgtt
cgtggttcggggaattgcgtacagtgcgacactcccctcaggaagagcaacttccgtgtg
cagctcttcgaagacccgtcggtagataaggaggtggagatccgcaagaaggtgctgaag
atatacaacaagagggagtttgacttccccagcctcagagagtacaacgactacctggag
caagtggaggacatagtttacaacatgacaaacaacgtggacgtggagaacaccaagttg
aggatggatcagtatcagcgggagaacagggatctcattcagaagaataaggctactctt
acccgagagcaggaggagctggaggagctgctgctgctggagaagcaggggaacgaacag
cggagactggaggtgctgcaggaggagcagaggcagctgcaggccaggaggaagaacaag
caggctctgctggatgagctggaaaagtcccaggttcccgccaccatcttgttggctcaa
cacaaggcccgtgctgctgagctggaggtggagattgaacatcagaaacagtcggtcaaa
cctgcaactctgttttcaagtggaatccagcgtcagaccgtgtctctcctgcctcctcca
aagattgaggaagtcctgtacaagtacaaagctcttcacattgaaacctacggacccctg
gtaccggaactggaacagctgggaagaatagggtatctgaaccacgtgcgggcggccatg
cctcaggacacagctggaggatacacctcagccctggcctgtcatcgagccattcaggac
gccttcagtggcctgttcccgtcgtag
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