Cynoglossus semilaevis (tongue sole): 103376976
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Entry
103376976 CDS
T04866
Symbol
pola1
Name
(RefSeq) DNA polymerase alpha catalytic subunit
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
103376976 (pola1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csem03032
]
103376976 (pola1)
Enzymes [BR:
csem01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
103376976 (pola1)
DNA replication proteins [BR:
csem03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
103376976 (pola1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
DUF1744
DNA_pol_B_2
PLK4_bind_CEP152
MTR4_beta-barrel
Motif
Other DBs
NCBI-GeneID:
103376976
NCBI-ProteinID:
XP_008305795
LinkDB
All DBs
Position
3:5143720..5201242
Genome browser
AA seq
1470 aa
AA seq
DB search
MGPVTNPDKDVENPDGDDDSCGLAKSRSRREKREKVGRKSALEQLKKAKRGEKIKYEVDE
ITSVYEEVDEEQYSRMVQERQEDDWIIDDDGIGYVEDGREIFDDDLHDDIVENKKGKAGA
KAAASRKSVNKPAVTKPNTIKSLFMNSNVKRPAEKDVDLSKDDLLGDILQDLHSGKPSLL
TPPPVVTLKKKKSVGSPLNPFSIKSQTPKESPPAAASKARVIRPPPPDVGSRPSARPPPT
SPPSMKRTKVEAPEQKEEEEEKDVTDTLAFDGVDFDEPMEVGPEEAEPAGAEDESKPAAA
LATVKVEVKAEIPDPVLLCSRKGGSWGQEDTVAPVEVQVDSSQLPLVEGEGGEQVFRFYW
LDAFEEQYNHAGVVYLFGKVWIESAQSHVSCCVSVKNIERTIFLLPREFKVDPKTEEVSD
TPVEMMDVYQEFSELSEKFKIMKFKSKKVDKNYCFEIPDIPTNSEYLEIRYSADFPALPS
TLKGATFSHIFGTNTSSLEHFLLSRKIKGPCWLDIKTPQRIGQPVSWCKVEALALRSDLV
SVVKDLPPPPITVMSIALKTVQNLKTHHNEIVSLAALVHHQFHMDKAPPKPPYQTYFCVV
SKPTDCIFPYDFTEAVKKKNGKVEIAGTERTLLAFFLAKIHKIDPDVLVGHDIFGFDLEV
LLQRITVCKVPHWSKMGRLRRANMPKLGGRGSFAEKSATCGRLVCDVEISAKELIRCKSY
RLTELVSQVLKMERATVPQEEIRNLYSDSPHLLYLLELTWTDAELILLIMCELNVLPLAL
QITNIAGNVLSRTLMGGRSERNEFLLLHAFHDKDYIVPDKPSFKKALLEGEGEEDVDAGK
GKRRKKAAYAGGLVLDPKVGFYDKFVLLLDFNSLYPSIIQEFNICFTTVQREAQNTKKKQ
EVGEPEEIPDIPDSSLEMGILPKEIRKLVERRKQVKQLMKQHDVNPDLYMQYDIRQKALK
LTANSMYGCLGFSFSRFYAKPLAALVTHKGREILMHTKDMVQKMNLEVIYGDTDSIMINT
NSRSLEEVFKLGNKVKAEVNKLYKLLEIDIDGVFKSLLLLKKKKYAALIVESHSEGQYTL
KQELKGLDIVRRDWCDLAKECGNYVIGQILSDQNRDVIVENIQKHLTEVGEKVANGSIPL
NLYEINKGLTKDPQDYPDKKSLPHVHVALWINSQGGRRVKAGDTVSYVICKDGSTLAASQ
RAYALEQLQKQEGLTLDTQYYLAQQIHPVVSRICDPIEGIDGMVIASWLGLDPSQFKAQQ
QYQREEEADTTLGASFQLTDEERFKDCERFTFTCPQCGTDNIYDSVFEGAGSKLEPSLLR
CCHVSCGSHPIDYVANISNKLVLDIRRHIRKYYSGWLVCEDQMCQNRTRRLPIAFSRHGP
ICPVCTRATLRPEYSEKALYNQLCFYKFIFDWDIAAAKVQTAEEKNHVAGWHREKEVYRR
LKEVPDKVLANSGYSEINLSKLFQAFAALK
NT seq
4413 nt
NT seq
+upstream
nt +downstream
nt
atgggtccggtaacaaacccagacaaggacgtggagaatcccgatggagatgatgattcc
tgtggactggccaagtctcgttccagacgagagaagagagagaaggtggggaggaagtca
gcactggagcagctgaagaaggcgaagaggggagagaagatcaaatatgaggtggatgaa
atcaccagtgtgtatgaggaggtggacgaggagcagtactccaggatggttcaggagcga
caggaggacgactggattattgatgatgatggaatcggatatgtggaggacgggcgagaa
atctttgatgatgatctgcatgatgacattgtggaaaacaaaaaagggaaagcaggtgct
aaagcagcagcctccaggaaaagtgtgaacaaaccagccgtcaccaaacccaacactatt
aagagcctcttcatgaacagcaatgttaagagaccagctgagaaagacgtggatctgtcc
aaagacgacttattaggagatatcctgcaggatctgcattctgggaaaccctctctcctg
actcctccccctgtggtcactctgaagaaaaagaagtccgtgggatcacccttgaatccg
ttttccattaaatctcaaacaccaaaggagtcaccaccagctgcagcctcaaaggccaga
gtgattcgtccaccacctcctgatgtgggctccaggccatcagctcgtcctcctcccacc
tcacctccttccatgaagaggacaaaagtggaggcaccagaacaaaaagaagaagaagaa
gaaaaagacgtgaccgacactctggcctttgacggagtggactttgatgaaccgatggag
gttggacctgaggaggctgagcctgcaggtgcagaggatgaatctaaaccagcagcagca
ttggcgacagtgaaggtggaggtcaaagcagagattccagatcctgttcttctttgcagc
aggaaaggaggctcctggggacaggaggacactgttgctccagtggaggtgcaggtcgac
tctagccagctccctctagtggaaggggaaggcggggagcaggttttccgcttctattgg
ttggatgcctttgaggagcagtacaaccacgcaggtgtggtgtatctgtttggaaaagtg
tggatcgagtcggcacagtctcacgtcagctgctgcgtgtcggtcaagaacattgagagg
accatattcctcttacctcgggagtttaaagtggatcccaagacagaagaggtgtcagac
actcctgtagaaatgatggacgtttaccaggagtttagtgaactctctgagaagttcaag
atcatgaagtttaagtctaagaaagtagacaagaactactgctttgaaattcctgacatt
cccactaacagcgagtatctggaaatccgatattctgctgactttcctgctctaccctca
accctgaagggggcaacattttctcacatttttggcaccaacacctccagtctggagcac
ttcctgcttagcagaaagatcaaagggccatgctggcttgacatcaaaacgcctcagcgg
attggtcagccagtgagctggtgtaaagtggaggctctggccctgaggagtgacctggtc
tctgtggttaaagatctgcctcctcctcccatcactgtcatgtccatcgccctcaagact
gtgcagaatctgaagactcaccacaacgagattgtgtcgttggctgcacttgttcaccat
cagttccacatggacaaagctccacccaaacccccctatcagacctacttctgtgtggtc
agtaaaccaacagactgtattttcccatatgacttcacagaagcagtgaagaagaagaac
ggtaaggtggagatagctggtacagagcgaactctgcttgcattctttttggccaaaata
cacaagatcgaccctgatgtcctggtgggtcacgacatcttcggcttcgacctggaggtg
cttctgcagaggatcactgtgtgcaaagttccccactggtccaagatgggacgtttaagg
agagccaacatgcccaaattagggggtcgaggttcatttgccgagaaaagtgcaacctgc
ggtcgcctggtgtgtgacgtggaaatttcggccaaggagctgatccgctgtaaaagttac
cgcctgacggagctggtctctcaggtgctgaagatggagagagccaccgtgccacaggaa
gaaatcagaaatctctatagtgactctcctcacctgctctacttgttagagctgacgtgg
acagacgctgaactgatcctcctgatcatgtgtgagttaaatgtgctgccgttggctctg
cagatcaccaacatcgctggcaacgtcttgtctcgaactctgatgggcggtcgctctgaa
agaaatgagttcctgctgcttcacgctttccatgacaaagactacatcgtccctgacaaa
ccctccttcaaaaaggctctgctggagggtgaaggagaagaagacgtggatgcaggaaaa
gggaagagaaggaagaaggctgcctacgctggaggtctggtgctggatcctaaagttgga
ttttatgacaagtttgtgctgctgctggacttcaacagtctgtatccatcaatcattcag
gagtttaacatctgcttcaccacagtgcagagagaagcccaaaacacaaagaagaaacaa
gaggtaggcgagcctgaggagattcctgatatcccagattccagcctggaaatgggaatc
ctgccaaaggagatcaggaagctcgtggagcggcgtaaacaagtcaaacagctgatgaag
cagcatgacgtcaacccagatctttacatgcagtatgacatccgtcagaaggctctgaag
ctaactgctaacagcatgtacggctgtctgggattcagcttcagccgcttctatgcaaaa
ccactggcagccctggtgacgcacaagggtcgagagattctgatgcacacaaaagacatg
gtgcagaagatgaatctggaggtcatctacggagatacagactctattatgatcaacacc
aacagcaggtctctggaggaggtcttcaaactcggcaacaaggtcaaggctgaagtcaac
aaactttacaaactgcttgagattgacattgacggagtgttcaagtcccttctgctgctg
aagaagaagaaatacgctgctctgattgtggagagtcacagtgaaggacagtatactctc
aaacaggagctgaaaggcttggacattgtccgcagagattggtgtgacctggccaaggaa
tgtggcaactatgtgattggacagatcttgtcagaccagaatcgtgatgtcattgttgag
aacattcagaaacacctaacagaagttggggaaaaggtagccaatggatccattcccctc
aacctgtacgagatcaacaagggtctgacaaaagatcctcaggattatccagacaagaaa
agcctcccccacgtccatgtggctctctggatcaactctcagggaggtcgcagggtcaaa
gctggtgatacagtctcctacgtcatctgtaaggatggttccacgcttgctgctagtcag
agagcgtacgctctggagcagctccagaagcaggagggtctaactctggatactcagtat
tatttggctcagcagatccaccctgtggtgtctcgcatctgtgaccccatcgagggcatc
gatggcatggtcatagcctcgtggctgggtctggaccccagccagttcaaggctcaacag
cagtaccagagagaggaggaggccgacaccactctgggggcctcgttccagctgacggac
gaagagcgcttcaaagactgcgagaggttcactttcacctgccctcagtgtggcaccgac
aacatctacgacagtgtctttgaaggagctggctcaaagctggagcccagcttgttgcgt
tgctgtcacgtctcctgtggaagccacccaatcgactacgtggccaacatcagcaacaaa
cttgtcctcgacatccgtcggcacatcaggaaatactactctggctggttggtgtgtgag
gaccagatgtgtcagaacaggaccagacgtttgcccattgccttctcccgccatggaccc
atctgccccgtctgcaccagggcaactctccgacctgagtactctgaaaaggccctgtac
aaccagttgtgcttctacaaattcatcttcgactgggacatcgctgctgccaaagtgcaa
actgctgaagaaaaaaatcatgtggccggatggcacagagagaaggaagtgtaccgcagg
ctgaaggaagtccccgacaaagtcctggccaacagtggctactctgagatcaatctgtcg
aaactcttccaggcgttcgccgccctcaagtaa
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