KEGG   Cynoglossus semilaevis (tongue sole): 103378678
Entry
103378678         CDS       T04866                                 
Symbol
itgb6
Name
(RefSeq) integrin beta-6 isoform X1
  KO
K06589  integrin beta 6
Organism
csem  Cynoglossus semilaevis (tongue sole)
Pathway
csem04510  Focal adhesion
csem04512  ECM-receptor interaction
csem04518  Integrin signaling
csem04810  Regulation of actin cytoskeleton
csem04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:csem00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    103378678 (itgb6)
   04518 Integrin signaling
    103378678 (itgb6)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    103378678 (itgb6)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    103378678 (itgb6)
   04810 Regulation of actin cytoskeleton
    103378678 (itgb6)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:csem04147]
    103378678 (itgb6)
   04515 Cell adhesion molecules [BR:csem04515]
    103378678 (itgb6)
Exosome [BR:csem04147]
 Exosomal proteins
  Exosomal proteins of epithelial cells
   103378678 (itgb6)
Cell adhesion molecules [BR:csem04515]
 Integrins
  Integrin beta subunits
   103378678 (itgb6)
SSDB
Motif
Pfam: Integrin_beta Integrin_b_cyt PSI_integrin EGF_integrin EGF_2 I-EGF_1 EGF_Teneurin EGF_TEN
Other DBs
NCBI-GeneID: 103378678
NCBI-ProteinID: XP_008308189
LinkDB
Position
5:complement(3174985..3192747)
AA seq 792 aa
MGISLLILILHYWINTAAGLCSDGGAVTCDQCLQLSADCAWCSQENFTEWYSVSERCDTL
DALVVKGCAQSHLVFPVSEAQVLHNRPQGEEEEDAANSTQISPQKMSLKLRPGSQLTFQV
KIKQTEDYPVDMYYLMDLSASMIDDLEQIKDLGSSLSREMAILTSKFRMGFGSFVEKPTL
PFIKITEEQLANPCSSVATTCLPTFGYKHILSLTSSTDKFNEIIASQRVSANVDLLEAGF
DAIMQAAVCGDKIGWRSDSMRLLVFVSDADSHFGMDSKLAGIVIPNDMQCHLDVNNEYSM
STVQEYPTLGQLIDKVVENNILLIFAVTQEQIHNYKNYANLIPGATVGVLAKDSRNILEL
IVTAYKELRSEIELEVLGDTDDLQMSFTAICPNGTVLPGLKRCSSIKPGETVVFNVTVEL
PGCLSGVRQFSFKPVGLQDSLEVELESLCSCDCQHLPEGNSSSNSSSSSSSSQCSEERGD
FHCGICVCHPGFLGSQCECNEETALLSNCLANNASEMCSGQGQCYCGQCVCDSSNFGRIY
GRHCECDNYSCVRFRGELCGGHGVCDCGECQCDTGWTGEYCNCSSSTDACVSEDGAVCSG
RGRCECGRCVCSVPGASGETCDKCPTCGDACNSARGCVECHLQDKDDTDSCNQNCSVPKV
YINTTGDYDSSSLPCTLMTENECWISFNAVASETGTVVYNLDMYGCPEPPNIPMIILGVS
LSVVCIGLILLSVWKVLVSVHDGKEVAKFEAERAKAKWQTGTNPLFRSSTSTFRNITYKN
TQKEKFITTDTC
NT seq 2379 nt   +upstreamnt  +downstreamnt
atggggatttctctgctgatcctgattctgcactactggatcaacaccgcggcaggactg
tgttcagatggcggcgctgtgacttgtgaccagtgtctgcagctcagtgctgactgtgcg
tggtgctcacaggagaacttcacagagtggtactcggtcagtgagagatgtgacacactg
gatgccttggtggtgaagggatgtgcccagagtcacctggtgttccctgtctctgaagcc
caagtccttcacaaccgcccacagggcgaggaagaagaggacgccgctaacagcacccag
atctcaccgcagaaaatgtccctcaaactgcgccctggcagtcaattgaccttccaggtc
aagattaagcagacggaggactaccccgtggacatgtactatctgatggacctgtccgct
tccatgatcgatgatctggagcagatcaaggacttgggctcctctctgtccagagaaatg
gccattcttaccagtaaatttcgcatgggctttggttcttttgtggagaaacctaccctg
ccttttatcaagatcacagaggagcagctggctaacccctgcagtagtgtcgcaacgacc
tgcttgccaacatttggctacaagcacatcttgtctctgacgagcagcacggacaagttc
aacgagataatcgcatcacagcgcgtttctgccaatgtcgacctgctggaggccggcttc
gatgccatcatgcaggcagctgtttgtggggacaagatcggctggaggagtgattccatg
aggctcctggtgtttgtcagtgacgctgattcacactttgggatggacagcaaattggcc
ggaatcgtgattcctaacgacatgcagtgtcacctagacgtcaacaatgagtactccatg
tccacagtacaggagtatccaactctgggtcagctgatcgataaagtggtggagaacaac
atcttactgatatttgccgtgacacaagagcagatacacaactacaagaactacgcaaat
ctcatccctggtgccacggtcggagtcctggccaaagattccaggaacatcctggaactg
attgttactgcctataaagaactgcgctcagagattgaacttgaggttctaggagacacc
gacgatctgcagatgtcctttacagccatttgtccgaacggtacagttctccccggcctg
aaacgctgctccagcatcaaaccaggagagacggtcgtcttcaacgtgaccgttgagctc
ccagggtgcctttcaggagtccgtcagttctccttcaaacctgtgggtttacaggacagt
ttggaagtggagctggagtctctgtgttcgtgtgactgtcaacatctccctgaagggaac
agcagcagcaacagcagcagcagcagcagcagcagccagtgctctgaagagcgaggagat
ttccactgtggcatatgtgtgtgtcacccaggcttcctcggatcacagtgcgagtgcaat
gaagagactgctttgttgagcaactgcctggcaaacaatgcgtcagagatgtgcagtggc
cagggccagtgctactgcggccagtgtgtgtgtgactcgtccaactttggccgcatctac
ggccgtcactgtgagtgtgacaactactcctgtgtccgtttccgtggagagctgtgtgga
ggtcatggtgtgtgcgactgtggggagtgtcagtgtgacacgggctggacgggagagtac
tgtaactgcagcagcagcactgacgcctgcgtgtcggaggacggcgctgtctgcagcggc
agaggccgatgcgagtgcggccgctgtgtctgctccgtccccggagcttctggggaaacg
tgtgacaagtgtccgacgtgtggagacgcctgcaactctgcaaggggctgcgtggagtgc
catctacaggacaaagacgacactgactcctgtaatcagaactgcagtgttcctaaagtt
tacatcaacacaacaggagattatgatagcagctctttgccctgcacactgatgacagag
aacgagtgctggatctcttttaatgcggtggcgagtgagacaggaactgtggtctacaat
ctggatatgtacggttgtccagaacctcccaacatccctatgattattttgggcgtctcc
ctttctgtggtttgcattggcctgatcctgctgagtgtgtggaaggtgctggtgtcagta
cacgatggtaaagaagtggccaagtttgaggcagagcgggcaaaggccaaatggcagacg
ggaaccaaccccttgttcagaagctcaacgtctacgttcagaaatatcacttacaagaac
acacagaaagagaagtttattacgacggatacctgctga

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