Cynoglossus semilaevis (tongue sole): 103379713
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Entry
103379713 CDS
T04866
Name
(RefSeq) integrin alpha-11-like
KO
K06587
integrin alpha 11
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem04510
Focal adhesion
csem04512
ECM-receptor interaction
csem04810
Regulation of actin cytoskeleton
csem04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103379713
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103379713
09142 Cell motility
04820 Cytoskeleton in muscle cells
103379713
04810 Regulation of actin cytoskeleton
103379713
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
csem04515
]
103379713
Cell adhesion molecules [BR:
csem04515
]
Integrins
Integrin alpha subunits
103379713
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_1
Integrin_A_Ig_2
VWA_2
FG-GAP_3
FG-GAP_2
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
103379713
NCBI-ProteinID:
XP_008309575
LinkDB
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Position
6:4592349..4606980
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AA seq
1212 aa
AA seq
DB search
MKRHTQTPEDHLRTIYLWIIVMDYTSLLLLLLLPGERNCFNFNSKTFKIFRGSKETQFGY
TVQQHEAAGRQWLLVGAPFESTGQQQTGDVFRCPLDNRNSVNCSRLNLGKLSLDNVSERK
DKMRLGMTLTSNPRDGSFVTCGPLWSHECGSSLYSTGICSKVSRNFRLSHTIAPALQRCE
TFMDIVIVLDGSNSIYPWSEVQDFLINILHKFYIGPGQTQVGVIQYGSTVVHEFTLGEYQ
TVEEVVEATRSIDQRGGEETRTALGINVARSEAFQRGGRPGAKKVMIVMTDGESHDSPQL
VQAVADSERDNITLYAIAVLGYYNRRGINPETFLKEIKFIASDPDEKHFFNVTDESALKD
IVDALGERIFSLEGTSSQGRGFGLQMAQAGFSSHLVKDGILLGAVGAYDWNGAVLKETKQ
GKVVPPKSSYQEEFPEELKNHAAYLGYSVGSLISSRGAQLYVAGAPRFNHTGKVIVFTLK
NTGNLTILQSLLGEQIGSYFGSELLSMDVDVDGQTDVLLVAAPMYYHQGWERGKVNIYTV
TPQTTFILQGVLVVTERSLNSRFGSAMAQIPDMNGDGFRELVVGAPLEDDHQGAIYVFHG
QDKSIQPQYKQRLAAAGFSAGLQYFGQTVHGVLDINQDGLVDLAVGALGAAVIIWSRGVV
QIQAQMTFEPQKVNIFNKDCRRGGKAVTCMSVTVCLSLDSRTKAATKTRTDVAIWYSLTL
DGKRFPPRAILDDSDRHQPRNLVLQIGEQSCQRLGFSVQETTDYGRPITVLLETGGQDPD
EGPILDPDSPRILRSELPFWNGCEQEDVCVPDLVLKSHTDLLSVQQFCSSRDLAVWSLCH
HQGARADRTFVVEAGRKRLVVFTRLKNEGENAYGTVLHISMSRNLLFSSLVVKDQSDVQI
DCFANDTLANQTSCYISAPFMRSMSQVSFRLEFEFSPSVFLDHAQVILSATSEGQEASVQ
DNHNNILLPLKYQTDLLFTRDPNTPRFELKASSSLPDQTDDSSLTFNLTYYIQNLGVFSV
KNLLFRADLWAVTPQNNQLLNITDSSILAQDAGSECELPEPRLPSPVKTEDMSSVPQLNH
NNSINLVVQCRLQLPTSRQVKVTLRGKLQLHALLAVNFRSVEILTTASIQLEESSPMFLQ
EDTPVRQIILELRKEEEHSVPFWIIVGSSLGGLLLLALLVLALWKLGFFDRQRRQEEEEQ
PVTNGKATEDEL
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagacacactcagacacctgaggaccatctgaggaccatctacctgtggattatt
gtcatggattacacctccctgctgctgctgctcctcctgccaggtgagagaaactgtttc
aacttcaactcaaagaccttcaagatcttccgtggatccaaagaaacacaatttggatac
acggtccagcaacatgaggccgcgggacgacagtggttgctggttggagctccgtttgaa
tccacagggcagcaacagactggcgatgtgttcaggtgtccactggacaacagaaattct
gtgaactgcagcagactaaacctgggaaagctttctctggacaacgtgtccgagaggaaa
gacaagatgagactgggaatgacgctgacgtccaatcccagggacggcagctttgtgacc
tgtggaccactctggtctcacgagtgtggaagttccctctacagcaccgggatctgctcc
aaagtcagtcggaacttcagactgtcccacaccatcgctccagctctgcagcggtgtgag
accttcatggacatcgtgattgttctggatggttctaattccatctacccctggtctgag
gtccaggacttcctcatcaacattctacataagttctacatcggcccaggtcagacccag
gtgggagtgattcagtacggctccacggtggtccacgagttcacactgggtgagtaccag
accgtggaggaggtggtggaggccaccaggagcatcgaccagcgtggtggagaggagaca
aggacggcactgggcatcaatgtggccaggtcggaggcgttccagcgaggaggtcgacct
ggagctaagaaggtgatgatcgtcatgacggatggagaatcccacgacagtcctcagctg
gtccaggctgtggccgacagtgagagggacaacatcaccctgtacgccatcgcggtcctg
ggttattacaaccgtcgaggaatcaaccccgaaaccttcctcaaagaaatcaagttcatc
gccagcgaccccgacgagaagcacttctttaacgtgacggacgagtcggcgctgaaggac
atcgttgacgctctgggagagaggatcttctctctggaaggaaccagcagtcagggccga
ggcttcggacttcagatggctcaggctgggttctcctctcacctggttaaagacggaatt
ctgctcggagccgttggagcctacgactggaacggtgccgtgctgaaggagaccaaacag
gggaaggtggtgcctccgaagtcgtcctaccaggaggagtttccagaggagctgaagaac
cacgcagcctacctgggctactctgtgggctcactcatttcttctcgcggtgcccagctc
tacgtagcaggagcgccacgattcaaccacaccggcaaggtcatagtcttcaccctgaag
aacacggggaacttgaccatcctgcagtcactgctgggagaacagatcggctcgtatttt
ggcagtgagttgttatcgatggatgtagacgtggacggacagaccgacgtcctcctggtg
gcagcacccatgtattaccatcagggctgggagagagggaaggttaacatctacaccgtt
acacctcagactacgtttatcctgcagggggtgctggtggtaactgaacgctctctaaac
tcacgctttggttcagccatggctcaaatccccgacatgaatggagacggattcagggaa
ctagtagtcggagcaccactggaggatgaccaccagggggctatttatgtttttcatggc
caggacaaaagcatccaaccacagtataaacagcgtttagctgctgcaggattctccgca
gggctgcagtactttggacaaactgttcatggcgttctggacatcaaccaagatgggctg
gtggacctggcagtgggcgcactgggagctgccgtcatcatctggtctcgtggtgtggtc
cagattcaggctcaaatgaccttcgagccccagaaggtcaacatcttcaacaaagactgt
cgtcgaggagggaaggcggtcacgtgcatgtctgtgacggtctgtctgagtctggactcc
aggaccaaggctgcgaccaagaccaggacagatgtggccatatggtacagcctgacgctg
gacggaaaacgttttcctccaagagccattttggacgactccgacagacatcagccgagg
aacctggtcctgcagatcggagaacagagctgccaacgccttggcttttctgtgcaggag
acgacagattacggacgacctatcacagtacttttggagacagggggacaggatccagac
gagggtccaatactggacccagactcaccgagaatcctgaggtctgagcttccattctgg
aacggctgtgaacaagaagatgtgtgcgttccagacctggtcctcaagagtcacacggac
ctcctgagtgttcaacagttctgcagctccagagatctggcagtctggtctctctgccac
caccagggggcgagggcagacaggacgtttgtggtggaagccgggcgaaagcgcctggtg
gtattcacccgattaaagaacgagggcgagaatgcttatggaactgttctccacatctcc
atgtccaggaacctgctgttctccagcctggtcgtcaaggaccaatcagatgttcaaatt
gattgctttgccaatgacacgctggccaatcagacgtcctgttacatcagcgctccattt
atgagatccatgtctcaggtctccttccgtctggagtttgagttcagtccctccgtcttc
ctggaccacgcccaggtcatattatcggccaccagtgagggtcaggaggcatccgtccag
gacaaccacaacaacatcctgcttcctcttaagtaccagacagacctgctgttcaccaga
gaccccaacactcctcgctttgaactcaaggcgtcttcatcgttaccggaccagaccgat
gacagctcgctgaccttcaacctcacctactacatccagaacctgggcgtgttctcagtg
aagaaccttctgttcagagccgacctctgggccgtgaccccacagaacaaccagctgctg
aacatcacagactccagcatcctggcacaggacgcaggatctgagtgcgagctgcctgaa
cccaggctgcccagtccggtgaagactgaggacatgtcctctgtcccccagctgaaccac
aacaacagcatcaacctggtggtgcagtgtagactccagctgcccacgtcccgacaggtg
aaggtgacgctgagaggaaaactgcagctccacgctctgctcgctgtcaacttccggtct
gtggagatcctgaccactgcctccatccagctggaggagtccagtcccatgttcctccag
gaagacacacctgtcagacagatcatcctggagctgaggaaggaggaggagcacagcgtc
cccttctggataatagtgggaagttcactgggaggtctgctgctgctggctttactggtg
ctggctctgtggaagctcggcttctttgacagacaacggagacaggaagaggaggaacag
cctgtaaccaatgggaaagcaacggaggacgagctatga
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integrated database retrieval system