Cynoglossus semilaevis (tongue sole): 103397978
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Entry
103397978 CDS
T04866
Name
(RefSeq) retinoic acid receptor RXR-gamma-B-like
KO
K08526
retinoid X receptor gamma
Organism
csem
Cynoglossus semilaevis (tongue sole)
Pathway
csem03320
PPAR signaling pathway
csem04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
csem00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
103397978
03320 PPAR signaling pathway
103397978
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csem03000
]
103397978
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
csem03310
]
103397978
Transcription factors [BR:
csem03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
103397978
Nuclear receptors [BR:
csem03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
103397978
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Nuc_recep-AF1
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
103397978
NCBI-ProteinID:
XP_008334667
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Position
2:9851098..9868497
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AA seq
467 aa
AA seq
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MWHPMASPATGGNSGRDMGYGHYSAGSMSAAHTHPPPMGGMVGHPSVISTSRQLHSPMST
LGSQMNGLASPYPVITSSLGSPSVSLQSPPNMNFGALTSPQMNSMNSVSSSEDIKPPPGL
QNLGNINYQSTSPGGMKRNPQMIKSQRIFPTGKHYGVYSCEGCKGFFKRTVRKDLTYTCR
DNKECLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRGKERGENEVESTSSFNEDMPV
DKILDAELAVEPKTETYTDGSPGNSTNDPVTNICQAADKQLFTLVEWAKRVPHFSELPLD
DQVILLRAGWNELLIASFSHRSVTVKDGILLATGLHVHRSSAHSAGVGSIFDRVLTELVS
KMKDMQMDKTELGCLRAIVLFNPDAKGLSNPPEVEALREKVYASLESYTKQKYPDQPGRF
AKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQIT
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtggcaccccatggcatctcccgcaactggagggaactctgggagggacatgggatat
ggtcactattccgccgggtcgatgagtgccgcccacactcatccaccacccatgggtggg
atggtgggacacccgtccgtcatcagcacctccagacaactacattctcccatgtccacg
ttgggctcacagatgaacggcctggcctcaccttaccccgtcattacgtcctcgttgggc
tcaccttctgtgtccctgcagtccccgcccaacatgaactttggagccctcaccagtccg
cagatgaactctatgaacagtgtcagcagctctgaggacatcaagcctccaccggggctg
cagaacctgggaaacatcaactaccagagtacaagccccggggggatgaagagaaatcca
caaatgataaaatcccaacgcatctttcccacagggaaacactatggcgtctacagctgt
gagggatgcaaaggcttctttaaaagaacagtccgcaaagatctcacgtacacatgtcga
gacaacaaggagtgcctgattgacaagaggcagcgaaaccgctgccagtactgtcgttac
cagaagtgcctggccatgggcatgaagagagaagcggtgcaggaagagaggcagcgtggg
aaagagcggggggagaatgaggtggaatctaccagtagtttcaacgaggacatgcctgtg
gacaagatcctcgatgctgagctggccgtggagccaaaaacagagacgtacactgacggc
agccccgggaactcgaccaacgacccagtcaccaacatttgccaagcagcagacaagcag
ctctttactttagtggaatgggcaaaaagagtcccgcacttctctgaacttcccttggat
gatcaggtcatcctactacgagcaggctggaacgaactgctcattgcctcattctctcat
cgctcagtcacggtcaaagacggcatcctgctggccacaggcctgcatgtccacaggagc
agtgcccacagtgctggtgtgggctccatatttgatagggtcttaacagagttggtatct
aaaatgaaagatatgcaaatggacaagacggagctgggctgtcttcgagccattgtcctt
tttaacccagatgcaaaaggtctctcgaatccacctgaagttgaggcactgagggaaaag
gtctacgcttcactggagtcatatacgaaacagaaatatccagaccagcctggcaggttt
gctaaactgctgctgcggctgccggcactgcgctccatcggcctcaagtgtctggagcat
ctgttcttcttcaagctgattggagacacacctatcgacaccttcctaatggagatgctg
gaggcgccacatcagatcacatga
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