Campylobacter subantarcticus LMG 24377: CSUB8523_0099
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Entry
CSUB8523_0099 CDS
T03572
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
csf
Campylobacter subantarcticus LMG 24377
Pathway
csf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
csf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CSUB8523_0099 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csf03021
]
CSUB8523_0099 (rpoA)
03400 DNA repair and recombination proteins [BR:
csf03400
]
CSUB8523_0099 (rpoA)
Enzymes [BR:
csf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CSUB8523_0099 (rpoA)
Transcription machinery [BR:
csf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CSUB8523_0099 (rpoA)
DNA repair and recombination proteins [BR:
csf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CSUB8523_0099 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
DNA_pol3_a_NII
Motif
Other DBs
NCBI-ProteinID:
AJC91673
LinkDB
All DBs
Position
82859..83872
Genome browser
AA seq
337 aa
AA seq
DB search
MRHITTSAYTPTEFSIENISDTVAKVSAWPFEIGYAITLAHPLRRLLYSSTVGFAPTGVK
IKGVAHEFDSMRGMLEDVALFIINLKKLRFKLKTNSEKEIVTFSFKGPKEICGKDLDNEV
VEVVNADSYLATINEDADLEFTLIIEKGIGYVPSEEVQNFLDPEFIALDAFFTPVKHAVY
DIEKVLFEDNPDYEKVVFTITTDGQISPSDAFKNALEAMYKQLSVFDKIANAQSVVRSQT
PNNEVEHVKLLQNITELNLSARSFNCLEKANVVYIGELALMSVSELADLKNLGKKSLDEI
KSVMESIGFPIGNSKLSDSAKETLKKKIIELKAQNEG
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgagacatattacaacttctgcttatacaccaacagagtttagtattgaaaatatcagt
gatacagtggcaaaagtaagtgcatggccttttgaaattggctatgctattactttggcg
catcctttgcgtcgtttgctttattcaagcacagtaggttttgctccaacaggggttaaa
atcaaaggcgtagcacatgaatttgatagtatgcgtggtatgcttgaagatgtggcattg
tttattatcaatctaaaaaaattaagatttaaactaaaaacaaattctgaaaaagaaatc
gtaacttttagttttaaaggaccaaaagaaatttgtggaaaagacttagacaatgaagtt
gttgaagttgtgaacgcagatagctaccttgcaacgattaatgaagatgcagatttggaa
tttactttaatcattgaaaaaggtataggttatgtgccttctgaagaagtgcaaaatttc
ttagatcctgaatttatagcacttgatgcattttttactccggtaaaacatgcagtttat
gatatagaaaaagtgctttttgaagataatccagattatgaaaaagttgtttttacaatc
acaactgatggtcaaatttcaccaagtgatgcttttaaaaatgctttagaagcaatgtat
aaacaattatcagtgtttgataagattgccaatgctcaaagcgttgtaagaagtcaaaca
ccaaataatgaagtagaacatgtaaaattacttcaaaatataactgagttaaatttaagc
gcaagaagttttaactgcttagaaaaagcaaatgtagtttatattggtgagcttgcttta
atgagtgttagcgaacttgcagatttaaaaaatctaggtaaaaaatctttagatgagatt
aaaagcgtaatggaatctataggttttcctataggaaattcaaaactcagtgatagtgca
aaagaaacgctaaagaaaaaaattattgaattaaaagcgcaaaatgaaggataa
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