Clostridium saccharolyticum WM1: Closa_0682
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Entry
Closa_0682 CDS
T01288
Name
(GenBank) transcriptional regulator, GntR family with LacI sensor
KO
K02103
GntR family transcriptional regulator, arabinose operon transcriptional repressor
Organism
csh
Clostridium saccharolyticum WM1
Brite
KEGG Orthology (KO) [BR:
csh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csh03000
]
Closa_0682
Transcription factors [BR:
csh03000
]
Prokaryotic type
Helix-turn-helix
GntR family
Closa_0682
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
GntR
Peripla_BP_4
HTH_41
HTH_11
HTH_DeoR
Rrf2
HTH_Crp_2
MarR_2
TrmB
Ribosomal_S19e
HTH_46
DUF4423
HTH_24
MarR
HTH_36
Motif
Other DBs
NCBI-ProteinID:
ADL03309
UniProt:
D9R5A3
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Position
773016..774116
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AA seq
366 aa
AA seq
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MEEDSGKAKYYVLMEELKMDIVSGRRKPGDRLPSEHELSASCHVSRHTVRKALSILEQEG
FIEAEHGRGTFVSRKAGRKQGSGNIAVITTYLSDYIFPRLIQGIDSVLTANGYSIILKNT
GNSRLRESKCLEEILEKDIDGLIIEPSKSDIMCGHKGLYDKLDFYQIPYVFIQGCNTHMK
DKPHILMDDSMGGYLVTKHLLELGHEHILGIFKADDSQGRNRHRGYVKAIQEAGFSYDPD
MVVWFHTEDRMTKPSGALRLMLEEGVPVDGIVCYNDQIAFEVMKTIEKGGFSVPEDISVT
GYDNSFIAENGLVKLTTIAHPQERLGAMAAELLLEKINHVPDEESKVERILKPVLIIRNS
CRDRRL
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagacagcggaaaagcaaaatactatgtattaatggaagaactgaaaatggat
attgtttcaggaaggcgcaagccgggagaccggctgccttcggaacacgagctgtcggcc
tcctgccatgtcagccgccatacggtgagaaaagcgttgtccattctggagcaggaagga
tttattgaggcagagcatggccggggaacttttgtatccagaaaggcaggaagaaaacaa
ggctcaggaaacattgcagtcattaccacctatctgtctgattatatttttcctcggctg
attcagggaatcgacagtgtgcttacggcaaacggctacagcatcatattgaaaaatact
ggaaacagcaggctgagggaaagtaaatgcctggaagagattcttgagaaggatattgac
ggtctcattattgaacccagcaagagcgatatcatgtgcggtcacaaaggactttatgat
aagctggatttttaccagattccttatgtgttcattcagggctgtaacacccatatgaaa
gataaacctcatatcctgatggatgacagcatgggagggtatctggtgacaaagcatctt
ctggaattgggacatgagcacattctgggtatattcaaggccgatgacagccagggaagg
aaccgtcacaggggatatgtaaaggccattcaggaggccggattttcttatgatccggat
atggtggtctggtttcatacggaagaccgtatgacaaagccttccggtgccttaaggctt
atgctggaagagggggtgcccgtagacggaattgtatgctacaatgaccagatcgccttt
gaggtgatgaaaaccatagaaaaaggcggattttccgtgcctgaggatatatccgttacc
ggatatgacaattcctttattgcagaaaacgggctggtgaagctgacaaccatcgcccac
ccccaggagcgcctgggggccatggcggcggagctgcttttggaaaagatcaaccatgtt
ccggatgaagaaagcaaagtggagcggatcttaaagccggtgctgatcatcaggaattcc
tgcagagaccggaggctttaa
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