Clostridium saccharolyticum WM1: Closa_2980
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Entry
Closa_2980 CDS
T01288
Name
(GenBank) phosphoesterase RecJ domain protein
KO
K06881
bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:
3.1.3.7
3.1.13.3
]
Organism
csh
Clostridium saccharolyticum WM1
Pathway
csh00920
Sulfur metabolism
csh01100
Metabolic pathways
csh01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
csh00001
]
09100 Metabolism
09102 Energy metabolism
00920 Sulfur metabolism
Closa_2980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csh03400
]
Closa_2980
Enzymes [BR:
csh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.7 3'(2'),5'-bisphosphate nucleotidase
Closa_2980
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.3 oligonucleotidase
Closa_2980
DNA repair and recombination proteins [BR:
csh03400
]
Prokaryotic type
Other factors with a suspected DNA repair function
Others
Closa_2980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
ADL05514
UniProt:
D9R782
LinkDB
All DBs
Position
complement(3219997..3220947)
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AA seq
316 aa
AA seq
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MSFFDEMLEDVKTVAIIGHVRPDGDCVGSCLAAYNYLEEHHPEVEAVVYLETPPAKFNYL
RNFDRIVSDFSENKEYDLCLCLDSSDTLRFGEALKFLTTAKKSLCVDHHVTNLRYAIKNI
VQDDASSTCEVLYGLLDESRISREVAECIYTGIIHDTGVFKYDCTSRKTMEIAGRLMEKG
IDFPKIIDDSFYRKTYIQNQILGRALLESITFHNGQCIFSAVSKKDMDFYGVTGADMDGV
IDHLRITEGVVCAIFMYETSCREYKVSLRSTTDLDVSKIAVYFGGGGHKKAAGCTMTGSV
HDVINNLSNQIVKQLN
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
gtgagtttttttgacgaaatgctggaagatgtaaaaacagtagcaatcattggccatgtc
cgcccggacggggactgcgttggttcctgtctggcggcatacaactacctggaagagcat
cacccggaagtggaagctgtggtttatcttgagactccccctgctaaattcaactatctc
agaaattttgaccgcattgtcagcgatttttcagagaataaggaatatgacctctgcctt
tgccttgacagcagcgatacccttcggttcggagaggcattaaagttcttaactaccgca
aaaaagagcctctgcgtggatcatcacgttactaatctaagatatgcgataaaaaatatt
gtacaggatgatgccagttccacctgtgaggtactatacggcctgcttgatgaaagcaga
atcagccgggaagtggcggaatgcatttataccggtatcatccacgataccggggtgttt
aaatatgactgtacctcaagaaaaaccatggagatcgcaggaaggctgatggaaaaggga
attgattttccaaagatcatcgacgacagcttttaccggaagacctatattcagaaccag
atcctgggcagagcgttactggagagcataacctttcataacggccagtgtattttcagt
gccgtaagcaaaaaggatatggatttttacggagtaaccggtgcagatatggatggagtc
attgatcatctccggatcacagagggagtggtatgtgccatattcatgtatgaaacctcc
tgcagggagtacaaagtgagcctgcgttccaccacggatcttgatgtgagcaaaatcgcc
gtttatttcggcggaggcggtcataaaaaggcagccggctgcaccatgacaggaagtgtt
catgacgtaatcaataatctgtcaaatcagattgtaaaacagcttaactag
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