Camellia sinensis (tea plant): 114277919
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Entry
114277919 CDS
T07364
Name
(RefSeq) zinc finger CCCH domain-containing protein 41-like
KO
K13192
RNA-binding protein 26
Organism
csin
Camellia sinensis (tea plant)
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csin01009
]
114277919
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csin03019
]
114277919
03041 Spliceosome [BR:
csin03041
]
114277919
Protein phosphatases and associated proteins [BR:
csin01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
114277919
Messenger RNA biogenesis [BR:
csin03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
114277919
Spliceosome [BR:
csin03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
114277919
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_Nup35
zf_CCCH_4
RNA_bind
zf-CCCH
DUF4407
Motif
Other DBs
NCBI-GeneID:
114277919
NCBI-ProteinID:
XP_028075683
LinkDB
All DBs
Position
Unknown
AA seq
927 aa
AA seq
DB search
MVLKVSSPKARALSPSDCVSDPEEKEISDDDDDDRNHKHRKRETRSQSMERDALEQVLIR
PYRKRNKPFENGHPYRGNDSQSSETWKSYNMAPLEKDLSVKFGKIRPGLATFSRASNWVN
QSLSAELGLNRGRGRESGSRGQCDPRFSSVDIASQMVPQVPVPPRLFAGRGLSNVSNSQS
APWSAFGLITGVPNGGLDTLHSLGLQGTLRPSISPSLNIGIPRQRCRDFEERGFCLRGDV
CPMEHGVNRIVVEDVQSLSQFNLPVSLPSAHLLGTPPNLVSVSAPSSMLINSKSLHAKSS
KPGMVDDGLGMNGVFTGSACAGGADFYDPDQPLWTNDCPETSTAMLGLNPSDETECLLDT
DPSDCHHVRLFEGTDNECKVRGAATAFGSQSTGSSVWGRIGTSKYDLKEKFDSTISSSNY
IENEEKEDRESLANLQHAACPGKHIIVEGMGSHDVDSSLKTQGDTGRSIRKPSQKALRTV
FVNGIPQKDNKRETLFSHFKKFGEVIDIYIPLNSERAFVQFSKREEADSALKAPDAVMGN
RFIKLWWANRDSIPDDGMSSGGNSASVTPRGAGAVLVPPYLSVVHRAKDNLQSTAPKMSV
PCASVGPVPTFDHPKPVVTNSPKAAPPLQKKPDGLELLKEEIRKKQELLDQKRNDFRRQL
DKLEKQATGLKGEVASEQAARRQKAGIVADIAKAATPRSSDSGTIVASPQTEVVVEKNKS
VENVVQQSSKSNTVTALQEPATLMHSIRPLAPAGAPFIMNRFKLDNRPTTFKIIPPLPTG
LANVAVLKEHFSAYGELSSVELEDVESIDAVASKNCSALISFTTRRSAERAFASGECWQG
HNLQFMWLASGNSSIDNDARDDPPTASIVPQDANPQPAGQVTPIDSPKVATSGNGESKNL
ERKDSSGECTERDEDLKSSSSAMSSDK
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atggtgctaaaagtttcatctccaaaggctagggctctttcaccttctgattgtgtcagt
gatcctgaagagaaagaaatcagtgatgatgatgatgatgatcgtaatcataagcatcgt
aagcgggagacacggtcccaatctatggagagagatgctctggaacaagttctaataagg
ccatacagaaagagaaacaaaccttttgaaaatgggcatccttatagggggaacgattct
cagtcaagtgaaacctggaaaagttacaatatggcccctctggagaaagacctatctgtg
aagtttggaaaaatacgccctggtttagcaacgttttcccgggcttcaaactgggttaat
caatcattgtctgctgagcttggtcttaataggggtagaggaagggaatctggttcacgg
ggccaatgtgatcctaggttcagctctgttgatattgcttctcaaatggttccccaggta
cctgttcctccaagactgtttgcagggagggggttgtcaaatgtttcaaactcacagagt
gctccttggagtgcatttggattgattactggagttccaaatggtggtctggatacactc
cattccctcggtttgcaaggaacgcttagaccatcaattagtccttcactaaatattggt
attccacgccaacgatgtagagattttgaggagcgtggcttttgcctaagaggagacgtg
tgtccgatggagcatggtgtcaatcggattgttgttgaagatgttcagagcctttcacag
tttaatctccctgtttcacttccaagtgcacacctgctgggaacgccacctaatttagtg
tcagttagtgctccttcgagcatgttgataaatagcaagagtctacatgctaaaagtagc
aagcctggaatggttgatgatggattgggcatgaatggtgttttcactggttcagcttgt
gcaggtggagctgatttttatgaccctgatcagcctctgtggactaatgattgtccagaa
acttctacagcaatgctaggactaaatccatctgatgaaactgagtgtttgttggacact
gacccctctgattgtcaccatgtcaggttatttgagggcactgacaatgaatgtaaggtg
aggggcgctgcaactgcttttggatctcaaagtacaggttcatctgtgtggggaagaatt
ggtacaagtaaatatgatctgaaagagaaatttgattctaccattagttcctcaaattat
attgaaaacgaagaaaaggaagatcgggaatcattagccaatctgcagcacgctgcctgc
ccagggaagcacatcattgtggagggcatgggctcacatgatgttgattcatcactgaag
acacaaggtgatactgggcgtagtatccggaaaccttctcaaaaggcgctgcgtactgta
tttgttaatggcattccccaaaaagacaacaaaagagaaacccttttttcacattttaaa
aaatttggtgaggttattgacatttatattccattaaatagtgaacgagcttttgttcag
ttctctaagagggaagaggcagactctgcgctgaaagcacctgatgctgttatgggtaac
aggtttattaagctatggtgggccaatcgggacagcattcctgatgatggaatgagtagt
ggtggcaatagtgcatcagtaactcctcgtggagctggagctgttttagttccaccctat
ctgtctgttgttcacagggcaaaggataatctccaatctacagctccaaaaatgagtgtc
ccctgtgcttctgttggtccggtgcctacttttgatcaccctaagcctgtggtgacaaac
agtcccaaagctgcacctcctttgcaaaagaagccggatggtttagaacttttgaaggag
gaaatccgtaaaaagcaggaattgcttgatcagaaacgcaatgacttccggcgccaattg
gataaactcgaaaaacaagctacaggtctcaaaggtgaagtagcatctgagcaggctgct
aggagacaaaaagcgggaatagtggctgatattgcaaaagctgcaactcccaggtccagt
gattctggtactattgtggcatcaccacaaaccgaagtggtggttgagaagaacaaatct
gtggagaatgttgtgcaacaaagttccaaatcaaatacggttacggcactgcaggaacct
gcaaccttgatgcattcaattcgtcctttggcacctgcaggagcacctttcatcatgaat
agattcaaattggataaccgccccaccacctttaaaattattccacccttaccaacaggc
cttgcaaatgttgctgttttaaaggagcatttctcggcttacggtgaactttcttccgta
gagctagaagatgtagagtctattgatgcagtggcatccaaaaattgctcagctcttata
tcttttacaacacgtcgttcagctgagagggcgtttgccagtggcgaatgctggcaaggc
cacaatttgcagtttatgtggctggcatctggtaattctagcattgacaacgatgctaga
gacgaccctccaactgcttctattgtgcctcaagatgctaaccctcagcctgctggacaa
gtcacacccattgattccccaaaagtggctacctcgggaaatggagaatccaaaaatttg
gaaagaaaagatagtagtggggaatgtacagagcgggatgaagatctgaagtccagttca
tctgcaatgtcgtctgacaaatga
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