KEGG   Camellia sinensis (tea plant): 114280829
Entry
114280829         CDS       T07364                                 
Name
(RefSeq) splicing factor SF3a60 homolog
  KO
K12827  splicing factor 3A subunit 3
Organism
csin  Camellia sinensis (tea plant)
Pathway
csin03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csin00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    114280829
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:csin03041]
    114280829
Spliceosome [BR:csin03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    114280829
 Complex B
    114280829
 Complex C
   U2 SnRNP specific factors
    114280829
SSDB
Motif
Pfam: SF3a60_Prp9_C SDE2_2C SF3A3 SF3a60_bindingd DUF6262 Desulfoferrod_N
Other DBs
NCBI-GeneID: 114280829
NCBI-ProteinID: XP_028079041
LinkDB
Position
Unknown
AA seq 509 aa
MSSTLLEVTRAGHEEVERLERLIVKDLQNEPASSKDRLFQNHRVRNMIDEITSTTLKLVE
IYEDKDSARKDEIAALGGQTATGTNVFSAFYDRLKEIREYHRRHPAARVVDVNEEYEELL
KEEPRIEFTGEEALGRYLDLHELYNEYINSKFAEPIEYSAYLDVFSQPHKIPRKLKLTRK
YREYLEKLQEYLIYFFDRTEPLQDLDRIFSKVITEFEEQWAIGQIQGWENEAQENGHVSA
QPAGIDLDYYSTVEELMEVGPERLKEALAALGLKTGGTIQQRAERLFLTKHTPLEQLDRK
HFAKGSRVSEQNANTAAPQQAESSKEIALMEAKMKKLCDLLQETIVRTKENVEKKQALTY
EEMEAEREEEEVQADTESDDDEQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICG
NHSYWGRRAYERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKQLWERIQERQGVNKWR
PDLEEEYEDKEGNIYNKKTYTDLQRQGLI
NT seq 1530 nt   +upstreamnt  +downstreamnt
atgtcgtcgactctactggaagtgactcgggcgggtcatgaggaagtcgagcggctcgag
cgactcatcgtgaaggatctccagaacgaaccggcctcaagcaaggaccgcctcttccag
aaccaccgtgtccgcaacatgatcgacgaaatcacttccaccactctcaaattggtcgag
atatatgaagataaagatagtgcgaggaaggatgagattgctgctcttggaggccagact
gccactggaacaaacgtgtttagcgcattttatgacagattgaaagagattcgtgagtac
catagacgtcatcctgctgcacgtgttgtcgacgttaatgaagagtacgaggagctactg
aaggaggaaccgcggattgagttcactggggaggaagcccttggaaggtatctagacttg
catgaattgtacaacgagtacattaactctaaatttgcggagcccattgaatactctgct
tacctcgatgttttttctcaaccgcataagatacctcgcaaactgaaattgaccaggaag
tacagggagtatttggaaaaactacaggagtatctgatatatttctttgataggacagag
cctttgcaagatcttgatagaatattctcaaaggtaattactgaatttgaggagcaatgg
gctattggccagatacaaggatgggagaatgaggctcaagaaaatgggcatgtttcagct
caacctgctggaatcgatcttgattattacagtacagttgaagagttgatggaagtggga
cctgagagattaaaggaggcattggctgcactgggacttaagacaggtggtactattcag
caacgtgcagagaggcttttccttacaaagcatacacctcttgaacagctggacagaaaa
cattttgccaagggctctcgtgtatccgaacaaaatgcaaacactgcagctcctcaacag
gctgagagttcaaaagaaattgcccttatggaagccaagatgaaaaaactctgcgatctg
ttgcaggagacaattgtgcggacaaaagaaaatgttgagaagaaacaggctttaacgtat
gaggaaatggaagcagagcgtgaggaggaagaggtacaagctgacactgaaagtgatgat
gacgagcagcagatttataatcccctgaagttgccaatgggttgggacgggaagcctata
ccttactggttatataagcttcatggtcttggtcaggaattcaaatgtgagatatgcggg
aatcacagttactggggccgcagggcttatgagcgacacttcaaggaatggcgacatcag
catgggatgcgttgtcttggcattccaaataccaagaacttcaacgaaatcacatcaatt
gaggaggcaaagcaactctgggagagaatacaagaacgacagggagtgaacaagtggcgc
ccggaccttgaagaagaatatgaagacaaagagggcaacatttacaataagaagacatat
actgatctgcagcgccagggattgatttaa

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