Camellia sinensis (tea plant): 114309728
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Entry
114309728 CDS
T07364
Name
(RefSeq) probable pectate lyase 12
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin00040
Pentose and glucuronate interconversions
csin01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
114309728
Enzymes [BR:
csin01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
114309728
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Paralog
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
DUF2852
Motif
Other DBs
NCBI-GeneID:
114309728
NCBI-ProteinID:
XP_028111319
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All DBs
Position
Unknown
AA seq
446 aa
AA seq
DB search
MLHISCIFLISLLSSFSPLGLAMLNLNLPGQHPNPEAVVQELQRRVNDSLSRRQMRSTTT
TTSTCPTGNPIDDCWRCDPNWQKRQRLADCAIGFGQYALGGKGGRIYIVTDSTDHDAVNP
LPGTLRYAVIQEEPLWIVFSTNMIIHLSEELIFNSYKTLDGRGADVHVTGGGCITLQYIT
NVIIHNIHVHHCYQSGNTNVRSSPTHYGYRTESDGDGISIFGARDIWVDHCSLSNCKDGL
IDAVMGSTGITISNNYFSHHNEVMLLGHSDDYLPDSGMQVTIAFNHFGEKLVQRMPRCRR
GFIHVVNNDFTQWEMYAIGGSGSPTINSQGNRYIAPFNSNAKEVTKRVGTEQEEWRDWNW
RSEGDIMVNGAFFVASGAGVEIKYEKAYSVEPKSASFIDQLTLNAGVLGSRSILSLSLSL
SFSFSFSFSFNEANIMLGWPKLSQWA
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgctgcacataagctgcattttcttgatctctcttctgagctcattctctccacttggg
ttagcaatgctcaacctaaatttgcctggtcagcacccaaatcctgaggctgttgtccaa
gaactccaaagaagagtgaatgattcactatcaagaagacaaatgcgatcaaccaccacc
accacatccacatgcccaacgggcaacccaatcgatgactgctggcggtgtgatccaaac
tggcagaaacgccagcgcctcgccgattgcgccattggcttcggccaatacgccctcggc
ggcaaaggcggccgaatttacattgtcacggattccaccgaccatgacgccgtcaatccc
ctccccggcaccctccggtatgctgtcatacaagaggaacccctttggatcgtcttctcc
accaacatgatcatccacctctccgaagaactcatcttcaactcctacaaaaccctcgat
ggccgtggtgccgacgtccacgtcactggcggtggctgcatcaccctccagtacatcacc
aatgtcatcattcacaacatccatgtccaccattgttatcagtcaggcaacactaacgtg
cggtcgagcccaacgcactacggttatagaaccgaatcagacggcgacggaatatccata
ttcggagcaagagacatctgggtagatcactgctcgctctcaaactgcaaggacggtctg
atcgacgcagtgatgggatcgacagggataacgatatcgaacaattatttctcgcatcat
aacgaggtgatgttgttgggacacagcgacgattacttgccggattcgggaatgcaggtg
acgatagcgttcaatcattttggagagaagttggtgcagaggatgccgaggtgtaggaga
ggatttatacatgttgtgaataatgattttactcaatgggagatgtatgccattggtggg
agtggaagtcctactattaatagccaagggaatcgttacattgctccttttaattctaat
gctaaagaggtaacaaagagagtggggacagagcaagaagaatggagagattggaattgg
aggagtgagggggacattatggtaaatggagcattctttgtggcatctggtgctggtgtt
gagatcaagtatgagaaggcttacagcgtggagcccaaatctgcttccttcattgaccag
ctcaccttgaatgccggtgtccttggttccaggtccattctctctctctctctctctctc
tctttttcattttctttttctttttcctttaacgaagccaatattatgttgggctggccc
aaattgagccagtgggcctaa
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