Camellia sinensis (tea plant): 114311675
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Entry
114311675 CDS
T07364
Name
(RefSeq) transportin-1-like isoform X1
KO
K18752
transportin-1
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114311675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csin03019
]
114311675
03009 Ribosome biogenesis [BR:
csin03009
]
114311675
Messenger RNA biogenesis [BR:
csin03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
114311675
Ribosome biogenesis [BR:
csin03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
114311675
Pre-60S particles
114311675
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_EZ
TPR_IPO5
HEAT
HEAT_GCN1
TPR_IMB1
TPR_DNAAF5
TOR1L1_N
IBN_N
HEAT_MROH2B_C
HEAT_EF3_N
PDS5
DUF7824
Motif
Other DBs
NCBI-GeneID:
114311675
NCBI-ProteinID:
XP_028113610
LinkDB
All DBs
Position
Unknown
AA seq
900 aa
AA seq
DB search
MAATSSWQPQEEGFIEICGLLKKQMSPTSDKSQILQQLHHYSQYPEFNNYLAFILARAEG
KPMEVRQAAGLLLKNNLRAAFKSMASPCQQHIKSELLPCLGAADRHIRSTAGTIISELVQ
IGGVFGWPELLHTLVQCLDSNDLNHMEGAMDALSKICEDIPQVLDSEMPGLTERPINVFL
PRLLQFFQSSHASLRKLSLGSVNQFIMLMPQVLYLSMDKYLQGLFILANDPAADVRKLVC
AAFVQLIEVRPAFLEPHLRNVIEYMLQVNKDPDDEVSLEACEFWSAYCGTELPPENLREF
LPHLIPILLSNMVYADDDESLVVSEEDGSLPDRDQDLRPRFHSSRFHGSENAEDEDDDVV
NIWNLRKCSAAALDILSNMFGDEILPTLMPIVQSRLSTTDDVAWKEREAAVLALGAIAEG
CINGLYPHLSEIVAFLTPRLDDKFPLIRSISCWTVSRFSKFIIQSINHQEGREQFDEVLM
GILRRILDDNKRVQEAACSAFATLEEEAAEELAPRLEIILQHLMCAFGKYQRRNLQIVYD
AIGTLADAVGGELNQPKYIDVMMPPLIAKWQQLSNSDKDLFPLLECFTSIAQALGTGFSQ
FAQPVFQRCIDIIHSQYLAKINPVSSGVQYDREFIVCSLDLLSGLTEGLGSGIESLVTQS
SLRDLLLQCCIDDAPDVRQSAFALLGDLARVCPIYLQPRLSEFLDVATKQLNTPKLKETI
AVANNACWAIGELAVKVREEISPIVMTLISCLVPILQHAEEFNKSLMENSAITLGRLAWV
CPELVSPHMEHFMQAWCIALSMYVLVLFFTTPRIRDDIEKEEAFRGLCAMVRTNPSGALS
SLVFMCKAIASWHEIRSEDLHNEVCQVLHGYKQMLRDGVWEQCMFTLEPPVKDKLSKYQV
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgacatcttcgtggcagccccaggaagaagggttcatagagatctgtggctta
ctcaaaaaacagatgtctccgacttccgataagtctcagattttgcagcaactccatcac
tactctcagtaccccgagttcaataactaccttgcttttatcctcgcgcgtgccgaggga
aaaccaatggaggttcggcaggctgctggattgcttctgaagaataaccttagagctgcc
tttaagtcaatggcttctccatgccagcagcatataaaatcagagttgttgccttgtttg
ggagcagcagataggcatataaggtctacagctgggaccattataagtgaacttgttcag
atagggggagtttttggatggcctgagctgctgcatactcttgtccagtgcttggatagt
aacgacttaaatcacatggaaggtgctatggatgctttgtccaagatttgtgaggatata
cctcaagtgcttgattcagagatgcctggattaactgagcgacccattaatgtattcctt
cctagattacttcagttttttcagtcttcacatgcctcactgaggaagctttcattgggt
tctgtaaatcaattcattatgttgatgccccaagttttatatttgtccatggataaatat
ctgcaaggtttgttcattcttgcaaatgaccctgctgcagatgtgcggaaattggtctgt
gcagcattcgttcagttaattgaagttcgtccagctttcttggagccacatctgaggaat
gtaattgaatatatgttgcaagtcaacaaggaccctgacgatgaggtctcccttgaagcc
tgtgaattttggtctgcatattgtggcactgagttaccacctgagaacctaagagaattc
ttgcctcacctaattccaattttgttgtcgaacatggtttatgctgatgatgatgagtca
cttgtggtttcggaggaggatgggtctctgccagatcgagatcaggatctgaggccccgc
tttcattcatcacgttttcatggatctgagaatgcagaagatgaagacgatgacgtagtc
aatatttggaatttacggaagtgcagtgcagctgctctagatattctctcaaatatgttt
ggtgatgagattttaccaacattaatgcctatagttcagtctaggttatccactactgat
gatgttgcctggaaagaaagggaagccgcagttttagctcttggtgccatagcagagggt
tgcatcaatggcctttatccccatttatcagagattgttgcatttcttaccccacgctta
gatgataagtttcctttgatacgaagtatctcatgttggacagtttcacgtttcagcaag
ttcattattcagagtattaatcatcaagaaggccgtgagcaatttgatgaagttctgatg
gggattctaagaaggatattggatgataacaagcgggtgcaagaggctgcttgttcagct
tttgcaactcttgaagaggaggctgccgaagagttggcaccgcgcttggaaattattctg
caacatctaatgtgtgcttttggaaaatatcagaggcggaacctccaaattgtatatgat
gccattggaactctagcagatgctgttggaggggaattaaatcagcccaagtatattgat
gttatgatgccgccattaattgcaaagtggcaacaactttcaaattcagacaaagacctt
tttcccctactggagtgctttacatcaatagcacaggcattgggtactggattttcgcag
tttgctcaacctgtatttcagaggtgcatagacatcatccactcccaatatttggcaaag
atcaatcctgtttcatctggcgttcagtatgatagagagttcatcgtgtgttctttggac
ttgctctctggacttacagaaggtctcggtagtgggatagagagtttggttacacaaagt
agtttgagggacctgcttcttcaatgttgcattgatgatgctcctgatgtccgacaaagt
gcatttgcattgcttggtgaccttgcaagagtctgtcctatttatttgcaacctcgtttg
tctgaatttctcgatgttgccactaagcaactgaacacccctaagctgaaggaaactatt
gctgtggcaaacaatgcttgttgggcaattggagaactagcagttaaggttcgggaagaa
atttctccaatagtgatgactcttatttcatgtttggttccaattcttcaacatgccgag
gagttcaataagtcacttatggagaatagtgctatcacccttggacgacttgcttgggtt
tgtccggagcttgtgtcaccacatatggagcatttcatgcaagcatggtgtattgcttta
tccatgtatgttcttgttttatttttcaccactcctcggatacgagatgatattgagaaa
gaggaagccttccgaggtctatgtgcaatggttagaacaaacccatctggggctttgagt
tcacttgttttcatgtgtaaagctattgcaagttggcatgaaataagaagtgaagatcta
cacaacgaagtttgccaagtgttgcatggttataaacagatgcttagggatggagtgtgg
gagcaatgcatgtttactttggagcccccggtgaaagacaagttgtcgaagtatcaagta
tga
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